RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, human

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL16A1-215	ENST00000488897	HOOK3	Q86VS8	718 aa		19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	FAM126B	Q8IXS8	530 aa		19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	UBL4B	Q8N7F7	174 aa		19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	TMEM40	Q8WWA1	233 aa		19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	MAGOHB	Q96A72	148 aa	Known RBP	19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	PRDM5	Q9NQX1	630 aa	Predicted RBP	19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897	ALG6	Q9Y672	507 aa		19.53	■□□□□ 0.72
COL16A1-215	ENST00000488897		A0A087WZ62	844 aa		19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	IQCF3	P0C7M6	154 aa		19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	IBSP	P21815	317 aa	Predicted RBP	19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	OSMR	Q99650	979 aa		19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	COG5	Q9UP83	839 aa		19.52	■□□□□ 0.72
COL16A1-215	ENST00000488897	EDN1	P05305	212 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	SYN1	P17600	705 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	TMOD1	P28289	359 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	GBP1	P32455	592 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	CCL23	P55773	120 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	FAAP100	Q0VG06	881 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	LAMTOR4	Q0VGL1	99 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	ALCAM	Q13740	583 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	RNF149	Q8NC42	400 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	SCLY	Q96I15	445 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	TMEM206	Q9H813	350 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	ZDHHC18	Q9NUE0	388 aa		19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	CNOT8	Q9UFF9	292 aa	Known RBP	19.52	■□□□□ 0.71
COL16A1-215	ENST00000488897	IGKV6-21	A0A0C4DH24	114 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	MBLAC1	A4D2B0	266 aa	Predicted RBP	19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	LRRIQ4	A6NIV6	560 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	TISP43	B9A030	160 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	LRRN2	O75325	713 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	NUDT17	P0C025	328 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	RTP1	P59025	263 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	CAPS	Q13938	189 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	RDH13	Q8NBN7	331 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	TLCD1	Q96CP7	247 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	UBE2T	Q9NPD8	197 aa	Predicted RBP	19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	CTTNBP2NL	Q9P2B4	639 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	CABYR	O75952	493 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	MAPT	P10636	758 aa	Known RBP	19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	CHRNA3	P32297	505 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	ZNF211	Q13398	564 aa	Predicted RBP	19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	ZNF618	Q5T7W0	954 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	PALB2	Q86YC2	1186 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	JAML	Q86YT9	394 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	SLC43A3	Q8NBI5	491 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	TMEM174	Q8WUU8	243 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	RAPGEF5	Q92565	580 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	ALG3	Q92685	438 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	SCLT1	Q96NL6	688 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	ERVK-5	Q9HDB9	667 aa		19.51	■□□□□ 0.71
COL16A1-215	ENST00000488897	MYH11	P35749	1972 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	C5orf60	A6NFR6	353 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	TULP1	O00294	542 aa	Predicted RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	PHF2	O75151	1096 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	FTL	P02792	175 aa	Predicted RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	HOXC8	P31273	242 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	CYP2C18	P33260	490 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	GPC5	P78333	572 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	ACTN3	Q08043	901 aa	Predicted RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	BYSL	Q13895	437 aa	Known RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	CCDC121	Q6ZUS5	278 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	ADAT2	Q7Z6V5	191 aa	Known RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	CENPT	Q96BT3	561 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	CABS1	Q96KC9	395 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	RPS6KC1	Q96S38	1066 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	PABPC3	Q9H361	631 aa	Known RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	LARS	Q9P2J5	1176 aa	Known RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897		K7ENM7	598 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	CHRNA1	P02708	482 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	ARL2	P36404	184 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	NPTX2	P47972	431 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	VAMP7	P51809	220 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	PMS2	P54278	862 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	UBE2Q1	Q7Z7E8	422 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	LINC01465	Q8N7H1	131 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	NLRP7	Q8WX94	980 aa		19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	ACTR5	Q9H9F9	607 aa	Predicted RBP	19.5	■□□□□ 0.71
COL16A1-215	ENST00000488897	LOXHD1	Q8IVV2	1947 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	RRN3P2	A6NIE6	340 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	PODXL	O00592	558 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	KIAA0391	O15091	583 aa	Known RBP	19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	CROCCP2	Q86T23	111 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	SERINC5	Q86VE9	423 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	PARP2	Q9UGN5	583 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	RTN2	O75298	545 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	PLTP	P55058	493 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	SWT1	Q5T5J6	900 aa	Known RBP	19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	C12orf56	Q8IXR9	622 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	SLC20A1	Q8WUM9	679 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	ACCS	Q96QU6	501 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	IFT122	Q9HBG6	1241 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	PCYOX1	Q9UHG3	505 aa		19.49	■□□□□ 0.71
COL16A1-215	ENST00000488897	DCDC2C	A8MYV0	355 aa		19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	DENND2C	Q68D51	928 aa		19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	RPUSD2	Q8IZ73	545 aa	Known RBP	19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	SEC16B	Q96JE7	1060 aa		19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	ZSWIM1	Q9BR11	485 aa		19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	SNX24	Q9Y343	169 aa		19.48	■□□□□ 0.71
COL16A1-215	ENST00000488897	TRIM43B	A6NCK2	446 aa		19.47	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms