RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 SLFN12LQ6IEE8 588 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 TMC8Q8IU68 726 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 PJA1Q8NG27 643 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 POMGNT1Q8WZA1 660 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 SENP8Q96LD8 212 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 RTP3Q9BQQ7 232 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 LRRC3Q9BY71 257 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 PLA2G2FQ9BZM2 168 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 FOXQ1Q9C009 403 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 GDE1Q9NZC3 331 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 MAFFQ9ULX9 164 aa12.15□□□□□ -0.46
RAB11FIP3-210ENST00000487899 DNAH14Q0VDD8 3507 aa12.15□□□□□ -0.47
RAB11FIP3-210ENST00000487899 F5P12259 2224 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 RIF1Q5UIP0 2472 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SPTLC2O15270 562 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PPP6R2O75170 966 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ECI2O75521 394 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CYP11A1P05108 521 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 IDEP14735 1019 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 STARD6P59095 220 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GPR17Q13304 367 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SCARA3Q6AZY7 606 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DTWD2Q8NBA8 298 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CXorf38Q8TB03 319 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SHKBP1Q8TBC3 707 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ATOH1Q92858 354 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ASB16Q96NS5 453 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CBWD1Q9BRT8 395 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DDX23Q9BUQ8 820 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 OXCT2Q9BYC2 517 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TNMDQ9H2S6 317 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PTPRJQ12913 1337 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LRRN2O75325 713 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SOAT2O75908 522 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MICAL2O94851 1124 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 IL18RAPO95256 599 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GJA1P17302 382 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GARTP22102 1010 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HOXD13P35453 343 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ALCAMQ13740 583 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ANGPT1Q15389 498 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MLF2Q15773 248 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FAM78AQ5JUQ0 283 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TANGO2Q6ICL3 276 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PDZD4Q76G19 769 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 USP37Q86T82 979 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 BORCS6Q96GS4 357 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZSWIM3Q96MP5 696 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ACCSQ96QU6 501 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF334Q9HCZ1 680 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ASAH2Q9NR71 780 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DPP3Q9NY33 737 aa12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-210ENST00000487899 OTOGLQ3ZCN5 2332 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PRR23AA6NEV1 266 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GFRA3O60609 400 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CUTAO60888 179 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PRPF6O94906 941 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 F13A1P00488 732 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DCNP07585 359 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ATF6P18850 670 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TAF6P49848 677 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EHHADHQ08426 723 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DUSP4Q13115 394 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GRM2Q14416 872 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 STXBP5Q5T5C0 1151 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 VITQ6UXI7 678 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EPM2AIP1Q7L775 607 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 NT5DC4Q86YG4 428 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 C1orf127Q8N9H9 656 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LEMD2Q8NC56 503 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms