RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NSUN7Q8NE18 718 aaKnown RBP5.31□□□□□ -1.56
CCDC66-221ENST00000487739 TRIB1Q96RU8 372 aa5.31□□□□□ -1.56
CCDC66-221ENST00000487739 SMOQ99835 787 aa5.31□□□□□ -1.56
CCDC66-221ENST00000487739 TRHDEQ9UKU6 1024 aa5.31□□□□□ -1.56
CCDC66-221ENST00000487739 CFAP20Q9Y6A4 193 aaKnown RBP5.31□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA12O60330 932 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 NPTX2P47972 431 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 TMPRSS9Q7Z410 1059 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 SH2D3CQ8N5H7 860 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 KAT5Q92993 513 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 COA7Q96BR5 231 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHB1Q9Y5F3 818 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA9Q9Y5G4 932 aaKnown RBP5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA8Q9Y5G5 932 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA7Q9Y5G6 932 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA6Q9Y5G7 932 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 PCDHGA3Q9Y5H0 932 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 WNT6Q9Y6F9 365 aa5.3□□□□□ -1.56
CCDC66-221ENST00000487739 SHTN1A0MZ66 631 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 LINC00473A8K010 186 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 GCOM1H8Y6P7 765 aaPredicted RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 GNAI3P08754 354 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 ABCG1P45844 678 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 KRTAP10-11P60412 298 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 GNAI1P63096 354 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 FAM153CQ494X1 144 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 PAPD7Q5XG87 772 aaKnown RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 TTC7BQ86TV6 843 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 PDSS2Q86YH6 399 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 NSUN6Q8TEA1 469 aaKnown RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 HASPINQ8TF76 798 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 ANKS1AQ92625 1134 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
CCDC66-221ENST00000487739 GNL3LQ9NVN8 582 aaKnown RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
CCDC66-221ENST00000487739 A0A0B4J269 797 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 WDR27A2RRH5 827 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 E9PLN8 166 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
CCDC66-221ENST00000487739 URI1O94763 535 aaPredicted RBP5.28□□□□□ -1.56
CCDC66-221ENST00000487739 ELFN1P0C7U0 828 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 MALP21145 153 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 CYP2C19P33261 490 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 GUCY2FP51841 1108 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 ITKQ08881 620 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 TUBB3Q13509 450 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 UAP1L1Q3KQV9 507 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 SLC4A10Q6U841 1118 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 AMIGO2Q86SJ2 522 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
CCDC66-221ENST00000487739 GLCCI1Q86VQ1 547 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
CCDC66-221ENST00000487739 LRIG1Q96JA1 1093 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 PBKQ96KB5 322 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 HAPLN3Q96S86 360 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 DMRTA2Q96SC8 542 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 VKORC1Q9BQB6 163 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 BRD9Q9H8M2 597 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.28□□□□□ -1.56
CCDC66-221ENST00000487739 NR2E3Q9Y5X4 410 aa5.28□□□□□ -1.56
CCDC66-221ENST00000487739 SPATA31A3Q5VYP0 1347 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 MANSC4A6NHS7 340 aaPredicted RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 CGB1A6NKQ9 187 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 FZD9O00144 591 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 F2RL2O00254 374 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 TRIAP1O43715 76 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 CHEK2O96017 543 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 ITPKBP27987 946 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 HNRNPMP52272 730 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 ADKP55263 362 aaKnown RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 MTMR1Q13613 665 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 RNF187Q5TA31 235 aaPredicted RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 KIAA1614Q5VZ46 1190 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 FCRLBQ6BAA4 426 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 FAM9AQ8IZU1 332 aaPredicted RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 POC1BQ8TC44 478 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 SMG7Q92540 1137 aaKnown RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
CCDC66-221ENST00000487739 ALG8Q9BVK2 526 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 SLC29A3Q9BZD2 475 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 CFAP97Q9P2B7 532 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 SERPINB13Q9UIV8 391 aa5.27□□□□□ -1.57
CCDC66-221ENST00000487739 ADGRA2Q96PE1 1338 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 WIPF3A6NGB9 483 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 ZNF785A8K8V0 405 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 F5H697 171 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 TTLL1O95922 423 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 PRKCGP05129 697 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 SMARCA1P28370 1054 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 NDUFV1P49821 464 aa5.26□□□□□ -1.57
CCDC66-221ENST00000487739 PSMC1P62191 440 aaKnown RBP5.26□□□□□ -1.57
CCDC66-221ENST00000487739 EXOSC10Q01780 885 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms