RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 MON1BQ7L1V2 547 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PHF13Q86YI8 300 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CREG2Q8IUH2 290 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 MCOLN2Q8IZK6 566 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 SYCE1Q8N0S2 351 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 SH3TC2Q8TF17 1288 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 TFAP2BQ92481 460 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF653Q96CK0 615 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PAK6Q9NQU5 681 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 FAM105AQ9NUU6 356 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 KLK14Q9P0G3 267 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PARP2Q9UGN5 583 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PADI3Q9ULW8 664 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 SQORQ9Y6N5 450 aa10.07□□□□□ -0.8
SF3B1-211ENST00000487698 V9GYY5 206 aaPredicted RBP10.07□□□□□ -0.8
SF3B1-211ENST00000487698 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 A0A0U1RQG5 324 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PIRO00625 290 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PTGESO14684 152 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF185O15231 689 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 GHRP10912 638 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CD52P31358 61 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CDH5P33151 784 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TNNC1P63316 161 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF394Q53GI3 561 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 C11orf63Q6NUN7 778 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PPP1R2P3Q6NXS1 205 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF572Q7Z3I7 529 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 NT5DC3Q86UY8 548 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TTC39CQ8N584 583 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 SLC4A11Q8NBS3 891 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 COG1Q8WTW3 980 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TRIM11Q96F44 468 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PPP1R10Q96QC0 940 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TWNKQ96RR1 684 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 MMS19Q96T76 1030 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ELOVL4Q9GZR5 314 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 UNC93B1Q9H1C4 597 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 STARD7Q9NQZ5 370 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CTTNBP2NLQ9P2B4 639 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TANC1Q9C0D5 1861 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PDE2AO00408 941 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 XPOTO43592 962 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 MGEA5O60502 916 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 KIF4AO95239 1232 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CD4P01730 458 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 MYBL1P10243 752 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CKAP4Q07065 602 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PAK2Q13177 524 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ERCC6LQ2NKX8 1250 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 DAAM2Q86T65 1068 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 GSTCDQ8NEC7 633 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 ANKRD7Q92527 254 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 HES6Q96HZ4 224 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 RNF19AQ9NV58 838 aa10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PUF60Q9UHX1 559 aaKnown RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-211ENST00000487698 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 KBTBD13C9JR72 458 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 ARVCFO00192 962 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CES2O00748 559 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 TLR3O15455 904 aaKnown RBP10.05□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF623O75123 536 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CKBP12277 381 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 LRPAP1P30533 357 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 RAB27AP51159 221 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
SF3B1-211ENST00000487698 ELF2Q15723 593 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 ZNF564Q8TBZ8 553 aaPredicted RBP10.05□□□□□ -0.8
SF3B1-211ENST00000487698 CAPZA3Q96KX2 299 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 NUP85Q9BW27 656 aa10.05□□□□□ -0.8
SF3B1-211ENST00000487698 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms