RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TXNDC11Q6PKC3 985 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 USP37Q86T82 979 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 LONP2Q86WA8 852 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 GPIHBP1Q8IV16 184 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 ARID3BQ8IVW6 561 aaPredicted RBP21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 KIF12Q96FN5 646 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 MKNK1Q9BUB5 465 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 SPTBN2O15020 2390 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 KMT2BQ9UMN6 2715 aaPredicted RBP21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 TTC26A0AVF1 554 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 MYBPHLA2RUH7 354 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 OR6C75A6NL08 312 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 SPECC1L-ADORA2AF8WAN1 911 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CLTAP09496 248 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 U2AF2P26368 475 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CTHP32929 405 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CNR2P34972 360 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 SMTNP53814 917 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 ZBTB6Q15916 424 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CSRP2Q16527 193 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 PPM1JQ5JR12 505 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CENPPQ6IPU0 288 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 PRR23CQ6ZRP0 262 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 TTC8Q8TAM2 541 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 LRRC3BQ96PB8 259 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 C2orf42Q9NWW7 574 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 UBQLN1Q9UMX0 589 aaKnown RBP21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 SLC27A5Q9Y2P5 690 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 CACNA1BQ00975 2339 aa21.16■□□□□ 0.98
SMPDL3A-202ENST00000487215 MTMR11A4FU01 709 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 LAD1O00515 517 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 CYP3A5P20815 502 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 PRPHP41219 470 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 TNFSF9P41273 254 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 MATR3P43243 847 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 ALDH1A3P47895 512 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 GUCY2FP51841 1108 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 DGKKQ5KSL6 1271 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 HEATR6Q6AI08 1181 aaKnown RBP21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 DSTYKQ6XUX3 929 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 DTHD1Q6ZMT9 781 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 GAREM2Q75VX8 874 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 RALGPS2Q86X27 583 aaPredicted RBP21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 TTC9BQ8N6N2 239 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 ATAD1Q8NBU5 361 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 ZFYVE19Q96K21 471 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 GTSE1Q9NYZ3 720 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 KCNG1Q9UIX4 513 aa21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.15■□□□□ 0.98
SMPDL3A-202ENST00000487215 PPP2R3AQ06190 1150 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 MYBPC2Q14324 1141 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 ARHGAP29Q52LW3 1261 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 OVOS1Q6IE37 1185 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 DNAJB7Q7Z6W7 309 aaPredicted RBP21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 SYT2Q8N9I0 419 aaPredicted RBP21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 PSMG2Q969U7 264 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 PNMA5Q96PV4 448 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 TMEM209Q96SK2 561 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 ATXN3LQ9H3M9 355 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 PPP4R2Q9NY27 417 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 ASB3Q9Y575 518 aa21.14■□□□□ 0.97
SMPDL3A-202ENST00000487215 LACTBL1A8MY62 500 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 DPYSL4O14531 572 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 PPEF2O14830 753 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 GDF9O60383 454 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 SOAT2O75908 522 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 TYMPP19971 482 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 HOXC13P31276 330 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 HYIQ5T013 277 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 GPR158Q5T848 1215 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 FAM200AQ8TCP9 573 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 BICD1Q96G01 975 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 OBP2AQ9NY56 170 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 ACACBO00763 2458 aa21.13■□□□□ 0.97
SMPDL3A-202ENST00000487215 TPRP12270 2363 aaKnown RBP21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 XPOTO43592 962 aaKnown RBP21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 PRAMEF12O95522 483 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 GABRR2P28476 465 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 SLC12A3P55017 1021 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 NCKAP1LP55160 1127 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 CACNB1Q02641 598 aaPredicted RBP21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 CCINQ13939 588 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 PON2Q15165 354 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 ENOX2Q16206 610 aaKnown RBP21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 HAUS6Q7Z4H7 955 aa21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 FAM160A2Q8N612 972 aaPredicted RBP21.12■□□□□ 0.97
SMPDL3A-202ENST00000487215 NPHP3-ACAD11A0A0J9YXS1 232 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 FAM189A1O60320 539 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 SEC24BO95487 1268 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 FGF19O95750 216 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 HOXA6P31267 233 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 TNK2Q07912 1038 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 ARHGAP15Q53QZ3 475 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 CEP68Q76N32 757 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 WDR5BQ86VZ2 330 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms