RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PPP4R4Q6NUP7 873 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 RSPH3Q86UC2 560 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 Q96MF0 132 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 CGRRF1Q99675 332 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 TMEM60Q9H2L4 133 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 FOXJ2Q9P0K8 574 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 RNF181Q9P0P0 153 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 STXBP5LQ9Y2K9 1186 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 FPGT-TNNI3KV9GXZ4 949 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 KAT6AQ92794 2004 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 TPP1O14773 563 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 ADCY6O43306 1168 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 ZBED1O96006 694 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 HRGP04196 525 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 HLA-DOAP06340 250 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 ELANEP08246 267 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 RHCEP18577 417 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 HTR1BP28222 390 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 MAP2K6P52564 334 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 RHDQ02161 417 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 HDAC1Q13547 482 aaPredicted RBP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 UBE4AQ14139 1066 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 RAB39AQ14964 217 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 PDZD4Q76G19 769 aaPredicted RBP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 TRMT2AQ8IZ69 625 aaKnown RBP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 FAM43AQ8N2R8 423 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 C3orf20Q8ND61 904 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 CCHCR1Q8TD31 782 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 FBXO41Q8TF61 875 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 SLC9A6Q92581 669 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 TMX3Q96JJ7 454 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 CLPTM1LQ96KA5 538 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 MRGPRX4Q96LA9 322 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 CDC5LQ99459 802 aaKnown RBP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 B3GNT5Q9BYG0 378 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 SENP6Q9GZR1 1112 aaPredicted RBP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 DDX21Q9NR30 783 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 POGKQ9P215 609 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 CLCA2Q9UQC9 943 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 POLHQ9Y253 713 aa4.47□□□□□ -1.69
SNRNP27-204ENST00000487029 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.69
SNRNP27-204ENST00000487029 TBKBP1A7MCY6 615 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 GPR32O75388 356 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 ARIH2O95376 493 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 AMY1AP04745 511 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 CFIP05156 583 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 NBPF7P0C2Y1 421 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 PHKG2P15735 406 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 FDXRP22570 491 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 GUCY1A2P33402 732 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 AGFG1P52594 562 aaKnown RBP4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 HK3P52790 923 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 PROK1P58294 105 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 APBA1Q02410 837 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 NOGQ13253 232 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 LLGL1Q15334 1064 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 SAFBQ15424 915 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 ANO6Q4KMQ2 910 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 CCDC157Q569K6 752 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 PRAMEF14Q5SWL7 426 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 DAAM2Q86T65 1068 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 KIAA0319LQ8IZA0 1049 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 REPS2Q8NFH8 660 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 PJA1Q8NG27 643 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 KLHDC4Q8TBB5 520 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 CASKIN2Q8WXE0 1202 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 RAB24Q969Q5 203 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 DMRTA2Q96SC8 542 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 TMEM140Q9NV12 185 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 CALCOCO1Q9P1Z2 691 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 AJAP1Q9UKB5 411 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 NR2E3Q9Y5X4 410 aa4.46□□□□□ -1.7
SNRNP27-204ENST00000487029 ANO9A1A5B4 782 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 CAPN8A6NHC0 703 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 CDKL5O76039 1030 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 IL2RBP14784 551 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 DDCP20711 480 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 PTPN7P35236 360 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 RHBDL3P58872 404 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 FAM193AP78312 1265 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 TLE1Q04724 770 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 SP140Q13342 867 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 MTM1Q13496 603 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 BMT2Q1RMZ1 405 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 KHDC1Q4VXA5 237 aaKnown RBP4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 EFCAB12Q6NXP0 572 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 Q6ZNX1 250 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 GADL1Q6ZQY3 521 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 CCDC149Q6ZUS6 474 aa4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 ZNF572Q7Z3I7 529 aaPredicted RBP4.45□□□□□ -1.7
SNRNP27-204ENST00000487029 ZGPATQ8N5A5 531 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms