RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KIAA1586Q9HCI6 787 aa13.97□□□□□ -0.17
SSR4-211ENST00000486204 PDE11AQ9HCR9 933 aa13.97□□□□□ -0.17
SSR4-211ENST00000486204 STK39Q9UEW8 545 aa13.97□□□□□ -0.17
SSR4-211ENST00000486204 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.97□□□□□ -0.17
SSR4-211ENST00000486204 CFAP47Q6ZTR5 3102 aa13.97□□□□□ -0.17
SSR4-211ENST00000486204 ANO9A1A5B4 782 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 ZNF233A6NK53 670 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 XPOTO43592 962 aaKnown RBP13.96□□□□□ -0.17
SSR4-211ENST00000486204 SP9P0CG40 484 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
SSR4-211ENST00000486204 RFX1P22670 979 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 BRCC3P46736 316 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 GLUD2P49448 558 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CASP4P49662 377 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 MYBPC2Q14324 1141 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CAMK4Q16566 473 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 RTP2Q5QGT7 225 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CENPPQ6IPU0 288 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 NT5DC4Q86YG4 428 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.17
SSR4-211ENST00000486204 KCNK12Q9HB15 430 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 KIAA1468Q9P260 1216 aa13.96□□□□□ -0.17
SSR4-211ENST00000486204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.95□□□□□ -0.18
SSR4-211ENST00000486204 I3L4J1 428 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 BIN1O00499 593 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 PIRO00625 290 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
SSR4-211ENST00000486204 TADA2AO75478 443 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 FGFR3P22607 806 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSR4-211ENST00000486204 PMS1P54277 932 aaKnown RBP13.95□□□□□ -0.18
SSR4-211ENST00000486204 PSMD6Q15008 389 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 C9orf57Q5W0N0 161 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 OTOP3Q7RTS5 596 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 C1orf127Q8N9H9 656 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 BEST2Q8NFU1 509 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
SSR4-211ENST00000486204 WNT16Q9UBV4 365 aa13.95□□□□□ -0.18
SSR4-211ENST00000486204 TPRP12270 2363 aaKnown RBP13.95□□□□□ -0.18
SSR4-211ENST00000486204 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 GOLGA6L22H0YM25 854 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 EXOC3O60645 756 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 CXCL14O95715 111 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 URODP06132 367 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 CFHP08603 1231 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 NR2F2P24468 414 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 CA8P35219 290 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
SSR4-211ENST00000486204 USP41Q3LFD5 358 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 FAM171A1Q5VUB5 890 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 LMBRD2Q68DH5 695 aaPredicted RBP13.94□□□□□ -0.18
SSR4-211ENST00000486204 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.94□□□□□ -0.18
SSR4-211ENST00000486204 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
SSR4-211ENST00000486204 GPR65Q8IYL9 337 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 SUSD3Q96L08 255 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 NOTCH4Q99466 2003 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 NUP62CLQ9H1M0 184 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 RXFP1Q9HBX9 757 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 INTS13Q9NVM9 706 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 DPP3Q9NY33 737 aa13.94□□□□□ -0.18
SSR4-211ENST00000486204 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 C2CD2LO14523 706 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 MAPK13O15264 365 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 SPTLC1O15269 473 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 NARSO43776 548 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 AKAP3O75969 853 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 CNPP09543 421 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 TKTP29401 623 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 MCM4P33991 863 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 CLDN10P78369 228 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 TFAMQ00059 246 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 SURF1Q15526 300 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 C1orf210Q8IVY1 113 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 GPR161Q8N6U8 529 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 ZNF516Q92618 1163 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms