RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 ARID2Q68CP9 1835 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 ZMYM2Q9UBW7 1377 aa10.77□□□□□ -0.68
SND1-213ENST00000486037 THADAQ6YHU6 1953 aa10.77□□□□□ -0.68
SND1-213ENST00000486037 CFAP46Q8IYW2 2715 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 A0A1W2PRU2 124 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 OTOL1A6NHN0 477 aaPredicted RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 EIF4E1BA6NMX2 242 aaKnown RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 TBX3O15119 743 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 RNF40O75150 1001 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 RECQL4O94761 1208 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 RHOBTB1O94844 696 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 EGFP01133 1207 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 THP07101 528 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 ATF2P15336 505 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 ELF1P32519 619 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 RFC5P40937 340 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 MAPK8P45983 427 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 CLCNKBP51801 687 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 KRT85P78386 507 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 Q4G0T1 1027 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 GLRA4Q5JXX5 417 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 CYP4A22Q5TCH4 519 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 PMS2CLQ68D20 193 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 C1orf228Q6PIY5 440 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 TMC8Q8IU68 726 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 NOSTRINQ8IVI9 506 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 ARID3BQ8IVW6 561 aaPredicted RBP10.77□□□□□ -0.69
SND1-213ENST00000486037 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 HACE1Q8IYU2 909 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 GLIS3Q8NEA6 775 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 C6orf50Q9HD87 102 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 PCDHA4Q9UN74 947 aa10.77□□□□□ -0.69
SND1-213ENST00000486037 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 GOLGA6L22H0YM25 854 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 TMEM189-UBE2V1I3L0A0 370 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 M0R2N6 131 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 ASAP2O43150 1006 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 GADD45BO75293 160 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 B3GAT3O94766 335 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 PRAMEF12O95522 483 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 EDN1P05305 212 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 GBP1P32455 592 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 TOB1P50616 345 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 GNL2Q13823 731 aaKnown RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 TMEM196Q5HYL7 178 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 ANKS3Q6ZW76 656 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 LURAP1LQ8IV03 231 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 BLIDQ8IZY5 108 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 LEO1Q8WVC0 666 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
SND1-213ENST00000486037 TMEM209Q96SK2 561 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 TPSD1Q9BZJ3 242 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 VAV3Q9UKW4 847 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 GON4LQ3T8J9 2241 aa10.76□□□□□ -0.69
SND1-213ENST00000486037 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 ANTXRLA6NF34 631 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 SLC37A4O43826 429 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 VNN2O95498 520 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 GLRA2P23416 452 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CEBPZQ03701 1054 aaKnown RBP10.75□□□□□ -0.69
SND1-213ENST00000486037 SOX4Q06945 474 aaPredicted RBP10.75□□□□□ -0.69
SND1-213ENST00000486037 SEMA3BQ13214 749 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 PCBP1Q15365 356 aaKnown RBP eCLIP10.75□□□□□ -0.696e-11■□□□□ 10.9
SND1-213ENST00000486037 ATL3Q6DD88 541 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CYP2U1Q7Z449 544 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CAMKK1Q8N5S9 505 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 TBCKQ8TEA7 893 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CCDC12Q8WUD4 166 aaPredicted RBP10.75□□□□□ -0.69
SND1-213ENST00000486037 TCP11Q8WWU5 503 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 PIGKQ92643 395 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 ZNF512Q96ME7 567 aaPredicted RBP10.75□□□□□ -0.69
SND1-213ENST00000486037 MTRQ99707 1265 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 DNAJC25Q9H1X3 360 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CRISPLD1Q9H336 500 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 PDZD7Q9H5P4 517 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 ASAH2Q9NR71 780 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 RGL1Q9NZL6 768 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 MBD1Q9UIS9 605 aaPredicted RBP10.75□□□□□ -0.69
SND1-213ENST00000486037 FBXL5Q9UKA1 691 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 RCOR1Q9UKL0 485 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 UNC79Q9P2D8 2635 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 TRIP11Q15643 1979 aa10.75□□□□□ -0.69
SND1-213ENST00000486037 NUP210Q8TEM1 1887 aaPredicted RBP10.74□□□□□ -0.69
SND1-213ENST00000486037 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms