RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MIGA2Q7L4E1 593 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 NECAB2Q7Z6G3 386 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 POC1BQ8TC44 478 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 COA7Q96BR5 231 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 TMX1Q9H3N1 280 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 CPNE5Q9HCH3 593 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.34□□□□□ -1.55
GCFC2-209ENST00000486016 CCDC154A6NI56 674 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 LINC00473A8K010 186 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 NT5C1B-RDH14C9J2C7 533 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 CD1AP06126 327 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 PPP3CBP16298 524 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 GPD1P21695 349 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 CTGFP29279 349 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 ABCG1P45844 678 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 KRT85P78386 507 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 CLUL1Q15846 466 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 PTF1AQ7RTS3 328 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 NSUN6Q8TEA1 469 aaKnown RBP5.33□□□□□ -1.56
GCFC2-209ENST00000486016 HASPINQ8TF76 798 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 PACSIN1Q9BY11 444 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 USP35Q9P2H5 1018 aa5.33□□□□□ -1.56
GCFC2-209ENST00000486016 ADGRA2Q96PE1 1338 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 PRSS29PA6NIE9 313 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 ANXA1P04083 346 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 CELA2AP08217 269 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 DSC2Q02487 901 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SRSF4Q08170 494 aaKnown RBP5.32□□□□□ -1.56
GCFC2-209ENST00000486016 TSTD2Q5T7W7 516 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 TOR1AIP2Q8NFQ8 470 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SCARB1Q8WTV0 552 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SNX19Q92543 992 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 KAT5Q92993 513 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 KLC4Q9NSK0 619 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SERPINB13Q9UIV8 391 aa5.32□□□□□ -1.56
GCFC2-209ENST00000486016 SPATA31A3Q5VYP0 1347 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 F2RL2O00254 374 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 CHRM2P08172 466 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 SLC16A1P53985 500 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 NXPH1P58417 271 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 TFF2Q03403 129 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 PIGFQ07326 219 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 SYDE2Q5VT97 1194 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 TAPT1Q6NXT6 567 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 PDSS2Q86YH6 399 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 RFKQ969G6 155 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 ZNF778Q96MU6 729 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 ETAA1Q9NY74 926 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 RNF7Q9UBF6 113 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
GCFC2-209ENST00000486016 MANSC4A6NHS7 340 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-209ENST00000486016 TOR1BO14657 336 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 ORC4O43929 436 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 CLSTN1O94985 981 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 MT-CO1P00395 513 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 RGS19P49795 217 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 FXR1P51114 621 aaKnown RBP eCLIP5.3□□□□□ -1.56
GCFC2-209ENST00000486016 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-209ENST00000486016 ITIH3Q06033 890 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 TCF15Q12870 199 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 SNAPC2Q13487 334 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 FCRLBQ6BAA4 426 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 FAM9AQ8IZU1 332 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-209ENST00000486016 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 TRIB1Q96RU8 372 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 SIDT1Q9NXL6 827 aaKnown RBP5.3□□□□□ -1.56
GCFC2-209ENST00000486016 ATP8A1Q9Y2Q0 1164 aa5.3□□□□□ -1.56
GCFC2-209ENST00000486016 PRKCGP05129 697 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 MALP21145 153 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 PCSK6P29122 969 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 NPTX2P47972 431 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 ACAP2Q15057 778 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 PCBP2Q15366 365 aaKnown RBP eCLIP5.29□□□□□ -1.56
GCFC2-209ENST00000486016 GADL1Q6ZQY3 521 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 AMIGO2Q86SJ2 522 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 FBXO41Q8TF61 875 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 DDB2Q92466 427 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
GCFC2-209ENST00000486016 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 PBKQ96KB5 322 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 OSBPL9Q96SU4 736 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 MRPS18AQ9NVS2 196 aaKnown RBP5.29□□□□□ -1.56
GCFC2-209ENST00000486016 TRHDEQ9UKU6 1024 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 ST3GAL5Q9UNP4 418 aa5.29□□□□□ -1.56
GCFC2-209ENST00000486016 GABRDO14764 452 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 RHOP08100 348 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 TOB1P50616 345 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 KIF23Q02241 960 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 MTMR1Q13613 665 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 ABCB5Q2M3G0 1257 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 ZNF425Q6IV72 752 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 FAM109AQ8N4B1 249 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms