RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
HDHD3-203ENST00000485934 CITO14578 2027 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 PPEF2O14830 753 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 SPTLC1O15269 473 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 CLSTN1O94985 981 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 C4BPAP04003 597 aaKnown RBP16.54■□□□□ 0.24
HDHD3-203ENST00000485934 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
HDHD3-203ENST00000485934 TNNC1P63316 161 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 NCOA4Q13772 614 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 ZACNQ401N2 412 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 LIN9Q5TKA1 542 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 KRT39Q6A163 491 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
HDHD3-203ENST00000485934 CCDC149Q6ZUS6 474 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 SV2AQ7L0J3 742 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 PALB2Q86YC2 1186 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 CXorf38Q8TB03 319 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 ZNF516Q92618 1163 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 BORCS6Q96GS4 357 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 ASB2Q96Q27 587 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 SFXN1Q9H9B4 322 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 TMEM8AQ9HCN3 771 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 ANO10Q9NW15 660 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 FBXL5Q9UKA1 691 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
HDHD3-203ENST00000485934 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 LINC01565O15544 149 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 TGM5O43548 720 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 TBC1D4O60343 1298 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 CST3P01034 146 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 RPL17P18621 184 aaKnown RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 IGFBP6P24592 240 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 PCSK1P29120 753 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 LTBRP36941 435 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 MYL7Q01449 175 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 WDR72Q3MJ13 1102 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 TCERG1LQ5VWI1 586 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 LILRA6Q6PI73 481 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 FAM114A1Q8IWE2 563 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 KREMEN2Q8NCW0 462 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 RIPOR3Q96MK2 946 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
HDHD3-203ENST00000485934 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 CLEC1BQ9P126 229 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 KIAA1671Q9BY89 1806 aa16.53■□□□□ 0.24
HDHD3-203ENST00000485934 CHD7Q9P2D1 2997 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 H3BQ06 376 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 N4BP1O75113 896 aaKnown RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 GLP2RO95838 553 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 CPB1P15086 417 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 EPCAMP16422 314 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 STX17P56962 302 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 DLG4P78352 724 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 TSPY1Q01534 308 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 SMAD4Q13485 552 aaKnown RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 KLHL40Q2TBA0 621 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 ZNF699Q32M78 642 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 ZNF667Q5HYK9 610 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 ATAT1Q5SQI0 421 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 C15orf39Q6ZRI6 1047 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 GLYCTKQ8IVS8 523 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 CMASQ8NFW8 434 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 PLEKHO2Q8TD55 490 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 NECTIN4Q96NY8 510 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 GZF1Q9H116 711 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 ADAM7Q9H2U9 754 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
HDHD3-203ENST00000485934 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-203ENST00000485934 CDH23Q9H251 3354 aa16.52■□□□□ 0.23
HDHD3-203ENST00000485934 TBX10O75333 385 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 ABLIM3O94929 683 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 ATF2P15336 505 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 HOXA9P31269 272 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 PIK3CAP42336 1068 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 MTHFRP42898 656 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 GCLMP48507 274 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 ARPP19P56211 112 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 MYL6P60660 151 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 GPR17Q13304 367 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 MAPRE1Q15691 268 aaKnown RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 DCAF17Q5H9S7 520 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 TDRD10Q5VZ19 366 aaKnown RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 WSCD1Q658N2 575 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms