RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SHC2P98077 582 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 KCNA1Q09470 495 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
SMC4-217ENST00000485867 ODR4Q5SWX8 454 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 DCLRE1AQ6PJP8 1040 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
SMC4-217ENST00000485867 C15orf39Q6ZRI6 1047 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 MFSD6Q6ZSS7 791 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 FAM228AQ86W67 206 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 VPS52Q8N1B4 723 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 NME8Q8N427 588 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 GIMAP8Q8ND71 665 aaPredicted RBP7.52□□□□□ -1.21
SMC4-217ENST00000485867 ATRIPQ8WXE1 791 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 ESR2Q92731 530 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 NELL1Q92832 810 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 PCYT2Q99447 389 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 SPATA6Q9NWH7 488 aaPredicted RBP7.52□□□□□ -1.21
SMC4-217ENST00000485867 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 GMEB2Q9UKD1 530 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 DDX19BQ9UMR2 479 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 GINS2Q9Y248 185 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.52□□□□□ -1.21
SMC4-217ENST00000485867 ASPMQ8IZT6 3477 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 TTC41PQ6P2S7 1318 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 NT5C1B-RDH14C9J2C7 533 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 ATP9AO75110 1047 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 PROS1P07225 676 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 CTSAP10619 480 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
SMC4-217ENST00000485867 METAP2P50579 478 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMC4-217ENST00000485867 STARD6P59095 220 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 CSTF1Q05048 431 aaKnown RBP7.51□□□□□ -1.21
SMC4-217ENST00000485867 GIT2Q14161 759 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 PLCB4Q15147 1175 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 PTPN14Q15678 1187 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 ZNF124Q15973 351 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 NKG7Q16617 165 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 SLC35G1Q2M3R5 365 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 CLLU1OSQ5K130 101 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 HDXQ7Z353 690 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 NLRX1Q86UT6 975 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 PPFIBP1Q86W92 1011 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 TMEM173Q86WV6 379 aaPredicted RBP7.51□□□□□ -1.21
SMC4-217ENST00000485867 ENAHQ8N8S7 591 aaPredicted RBP7.51□□□□□ -1.21
SMC4-217ENST00000485867 TMEM87AQ8NBN3 555 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 TMEM169Q96HH4 297 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 MYADMQ96S97 322 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 ZSCAN32Q9NX65 697 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 CTNND2Q9UQB3 1225 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 ZZEF1O43149 2961 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 CLUHO75153 1309 aa7.51□□□□□ -1.21
SMC4-217ENST00000485867 SPEGQ15772 3267 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.5□□□□□ -1.21
SMC4-217ENST00000485867 KLRF2D3W0D1 207 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 CLCN4P51793 760 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 POLGP54098 1239 aaPredicted RBP7.5□□□□□ -1.21
SMC4-217ENST00000485867 BCAR1P56945 870 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 HTR4Q13639 388 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 WTAPQ15007 396 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 CCDC178Q5BJE1 867 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 MTHFD1LQ6UB35 978 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 IQCA1Q86XH1 822 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 ZSWIM9Q86XI8 627 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 ECHDC2Q86YB7 292 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 HOMER1Q86YM7 354 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 KIAA0319LQ8IZA0 1049 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 CMASQ8NFW8 434 aaPredicted RBP7.5□□□□□ -1.21
SMC4-217ENST00000485867 GPRASP2Q96D09 838 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 FRMD6Q96NE9 622 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 RNF41Q9H4P4 317 aaPredicted RBP7.5□□□□□ -1.21
SMC4-217ENST00000485867 WDR6Q9NNW5 1121 aaKnown RBP7.5□□□□□ -1.21
SMC4-217ENST00000485867 SEMA3GQ9NS98 782 aa7.5□□□□□ -1.21
SMC4-217ENST00000485867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
SMC4-217ENST00000485867 A0A0D9SFI3 127 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 ZNF503-AS2A6NEH8 195 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 ANHXE9PGG2 379 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 LRP3O75074 770 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 KLRC1P26715 233 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 GNA15P30679 374 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 ALDH7A1P49419 539 aaKnown RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 MESP2Q0VG99 397 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 TRAF1Q13077 416 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 KIZQ2M2Z5 673 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 WIPI1Q5MNZ9 446 aaPredicted RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 N4BP2L1Q5TBK1 243 aaPredicted RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 DDX53Q86TM3 631 aaKnown RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 ZNF589Q86UQ0 364 aaPredicted RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 MFSD2AQ8NA29 543 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 OTUD7AQ8TE49 926 aaPredicted RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 STAMQ92783 540 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 TNPO1Q92973 898 aaKnown RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 SHDQ96IW2 340 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 CDHR1Q96JP9 859 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 FAM227BQ96M60 508 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 HSPA12BQ96MM6 686 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms