RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SNX9Q9Y5X1 595 aa21.4■■□□□ 1.02
COL6A2-208ENST00000485591 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.39■■□□□ 1.01
COL6A2-208ENST00000485591 C2orf71A6NGG8 1288 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 CXCL14O95715 111 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 CYP11A1P05108 521 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 CREMQ03060 361 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 ZNF667Q5HYK9 610 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 VARS2Q5ST30 1063 aaKnown RBP21.39■■□□□ 1.01
COL6A2-208ENST00000485591 ANKS3Q6ZW76 656 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 TOP6BLQ8N6T0 577 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 LNX1Q8TBB1 728 aaPredicted RBP21.39■■□□□ 1.01
COL6A2-208ENST00000485591 SEMA4DQ92854 862 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 NSUN3Q9H649 340 aaKnown RBP21.39■■□□□ 1.01
COL6A2-208ENST00000485591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL6A2-208ENST00000485591 TRANK1O15050 2925 aa21.39■■□□□ 1.01
COL6A2-208ENST00000485591 HIDE1A8MVS5 230 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 C2CD2LO14523 706 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 HUS1O60921 280 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 PRKCSHP14314 528 aaPredicted RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 IGFBP4P22692 258 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 TNNC1P63316 161 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 NOP14P78316 857 aaKnown RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 YWHAHQ04917 246 aaPredicted RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 CETN1Q12798 172 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 MRPL58Q14197 206 aaKnown RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 KRT31Q15323 416 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 PSMD5Q16401 504 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 WDR72Q3MJ13 1102 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 VWA3BQ502W6 1294 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 MIIPQ5JXC2 388 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 PRSS55Q6UWB4 352 aaPredicted RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 DPH6Q7L8W6 267 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 LIMS2Q7Z4I7 341 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 LUZP1Q86V48 1076 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 CCDC150Q8NCX0 1101 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 ANKRD20A12PQ8NF67 263 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 SPATA18Q8TC71 538 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 RXFP1Q9HBX9 757 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 MTRRQ9UBK8 725 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 LIMA1Q9UHB6 759 aaKnown RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 L1RE1Q9UN81 338 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 TIMM13Q9Y5L4 95 aaPredicted RBP21.38■■□□□ 1.01
COL6A2-208ENST00000485591 PLXNA3P51805 1871 aa21.38■■□□□ 1.01
COL6A2-208ENST00000485591 H7C4K7 107 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 CLSTN1O94985 981 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 OAZ2O95190 189 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 FOSL2P15408 326 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 CA8P35219 290 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 ZNF280DQ6N043 979 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 TMEM86AQ8N2M4 240 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 PDCL2Q8N4E4 241 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 PPP2R3CQ969Q6 453 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 PI4K2AQ9BTU6 479 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 NDST4Q9H3R1 872 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 TAB2Q9NYJ8 693 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 FNIP2Q9P278 1114 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 BACE2Q9Y5Z0 518 aa21.37■■□□□ 1.01
COL6A2-208ENST00000485591 PRRC2BQ5JSZ5 2229 aaKnown RBP21.37■■□□□ 1.01
COL6A2-208ENST00000485591 GTPBP10A4D1E9 387 aaKnown RBP21.36■■□□□ 1.01
COL6A2-208ENST00000485591 LRRN2O75325 713 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 P4HA1P13674 534 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 SOWAHAQ2M3V2 549 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 WSCD1Q658N2 575 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 OVOS1Q6IE37 1185 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 SPOPLQ6IQ16 392 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 ADGRD2Q7Z7M1 963 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 METTL23Q86XA0 190 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 FAXDC2Q96IV6 333 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 EMILIN2Q9BXX0 1053 aa21.36■■□□□ 1.01
COL6A2-208ENST00000485591 OXCT2Q9BYC2 517 aaPredicted RBP21.36■■□□□ 1.01
COL6A2-208ENST00000485591 NXF1Q9UBU9 619 aaKnown RBP21.36■■□□□ 1.01
COL6A2-208ENST00000485591 MYO7AQ13402 2215 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 TBC1D4O60343 1298 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 TPM2P07951 284 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 CNPP09543 421 aaKnown RBP21.35■■□□□ 1.01
COL6A2-208ENST00000485591 FAM163BP0C2L3 166 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 ATP1A3P13637 1013 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 CDK11BP21127 795 aaKnown RBP21.35■■□□□ 1.01
COL6A2-208ENST00000485591 NDUFV1P49821 464 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 TPM4P67936 248 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 WDR44Q5JSH3 913 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 ADGRF2Q8IZF7 708 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 LMO3Q8TAP4 145 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 ELMO3Q96BJ8 720 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 KLHL5Q96PQ7 755 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 MMS19Q96T76 1030 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 NIF3L1Q9GZT8 377 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
COL6A2-208ENST00000485591 GCNT4Q9P109 453 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 POLIQ9UNA4 740 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 SZT2Q5T011 3432 aa21.35■■□□□ 1.01
COL6A2-208ENST00000485591 MTCL1Q9Y4B5 1905 aaKnown RBP21.34■■□□□ 1.01
COL6A2-208ENST00000485591 LRRC10BA6NIK2 292 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 GOLGA6L19H0YKK7 550 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 TEX28O15482 410 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 TACC1O75410 805 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 ASPAP45381 313 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 COPB1P53618 953 aaKnown RBP21.34■■□□□ 1.01
COL6A2-208ENST00000485591 CTXN3Q4LDR2 81 aa21.34■■□□□ 1.01
COL6A2-208ENST00000485591 TCEAL5Q5H9L2 206 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms