RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 KIAA0355O15063 1070 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 CYP26A1O43174 497 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 NBNO60934 754 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 ABCB7O75027 752 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 H2AFZP0C0S5 128 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 FAM228BP0C875 321 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 MYBL1P10243 752 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 USP8P40818 1118 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 TUSC3Q13454 348 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 CNKSR3Q6P9H4 555 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 H2AFVQ71UI9 128 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 TRIM58Q8NG06 486 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 MIS12Q9H081 205 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 DSEQ9UL01 958 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 MGEA5O60502 916 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 CILPO75339 1184 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 CLSTN1O94985 981 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 GNA15P30679 374 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 CDH5P33151 784 aaPredicted RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 AARSP49588 968 aaKnown RBP eCLIP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 HADHBP55084 474 aaKnown RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 SNX16P57768 344 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 LILRA4P59901 499 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 GFPT1Q06210 699 aaPredicted RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 SPOPLQ6IQ16 392 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 SLC47A2Q86VL8 602 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 RHOT2Q8IXI1 618 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 ACRBPQ8NEB7 543 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 KAT5Q92993 513 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 GAD1Q99259 594 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 NT5C1AQ9BXI3 368 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM39AQ9NV64 488 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 REXO2Q9Y3B8 237 aaKnown RBP13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 PCDHB7Q9Y5E2 793 aa13.74□□□□□ -0.21
SFMBT1-206ENST00000485494 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■□ 23.3
SFMBT1-206ENST00000485494 ENPP3O14638 875 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 ZNF263O14978 683 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 HUS1O60921 280 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 TIMP1P01033 207 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 MYCP01106 439 aaPredicted RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM253P0C7T8 217 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 VDRP11473 427 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 MLH1P40692 756 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 LHX1P48742 406 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 FMO1Q01740 532 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 CENPCQ03188 943 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 IKBKEQ14164 716 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 UPP1Q16831 310 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 DCLRE1AQ6PJP8 1040 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 APPL2Q8NEU8 664 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 CTNNBL1Q8WYA6 563 aaPredicted RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 SECISBP2LQ93073 1101 aaKnown RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 TNIP3Q96KP6 325 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 DESI2Q9BSY9 194 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 TUBGCP4Q9UGJ1 667 aa13.73□□□□□ -0.21
SFMBT1-206ENST00000485494 USP27XA6NNY8 438 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 BAIAP3O94812 1187 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 UNGP13051 313 aaPredicted RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 TNNT1P13805 278 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 WARSP23381 471 aaKnown RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 ARHGAP25P42331 645 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 GPNMBQ14956 572 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 DNTTIP2Q5QJE6 756 aaKnown RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 ACAD10Q6JQN1 1059 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 UBE2Q1Q7Z7E8 422 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 NOP9Q86U38 636 aaKnown RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 ABI1Q8IZP0 508 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
SFMBT1-206ENST00000485494 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms