RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DGKKQ5KSL6 1271 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 CENPPQ6IPU0 288 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-227ENST00000485102 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 DNAJC25Q9H1X3 360 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 TUBGCP4Q9UGJ1 667 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 KMT2BQ9UMN6 2715 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-227ENST00000485102 SLC30A4O14863 429 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 XPOTO43592 962 aaKnown RBP14.16□□□□□ -0.14
HDAC6-227ENST00000485102 FAM189A1O60320 539 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 FGF19O95750 216 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CXCL8P10145 99 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 GJA1P17302 382 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 SLC12A3P55017 1021 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 NCKAP1LP55160 1127 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 DUSP4Q13115 394 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 C8orf34Q49A92 452 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 USP37Q86T82 979 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 ARID3BQ8IVW6 561 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-227ENST00000485102 YAF2Q8IY57 180 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 SYNPOQ8N3V7 929 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 NETO1Q8TDF5 533 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CSGALNACT1Q8TDX6 532 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 PSMG2Q969U7 264 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 RSPRY1Q96DX4 576 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 MKNK1Q9BUB5 465 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 HAPLN2Q9GZV7 340 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CRISPLD1Q9H336 500 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 LARSQ9P2J5 1176 aaKnown RBP14.16□□□□□ -0.14
HDAC6-227ENST00000485102 ANKFY1Q9P2R3 1169 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 SPAG17Q6Q759 2223 aa14.16□□□□□ -0.14
HDAC6-227ENST00000485102 MAP1BP46821 2468 aaKnown RBP14.16□□□□□ -0.14
HDAC6-227ENST00000485102 CHD8Q9HCK8 2581 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 A0A1W2PRU2 124 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 K7ESF4 209 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 SLC26A4O43511 780 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 HRO43593 1189 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 PIGRP01833 764 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
HDAC6-227ENST00000485102 ALDH1A3P47895 512 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 LILRA4P59901 499 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 ATP2C1P98194 919 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-227ENST00000485102 SATB1Q01826 763 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 SPEM2Q0P670 501 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 CSRP2Q16527 193 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 SPATA1Q5VX52 437 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 GAREM2Q75VX8 874 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 DNAJB7Q7Z6W7 309 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-227ENST00000485102 LONP2Q86WA8 852 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 CD302Q8IX05 232 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 PNMA5Q96PV4 448 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 SLITRK6Q9H5Y7 841 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
HDAC6-227ENST00000485102 DCDC2BA2VCK2 349 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 MTMR11A4FU01 709 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 SEC24BO95487 1268 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 CYP11A1P05108 521 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 ADRB1P08588 477 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 CTHP32929 405 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 PLCB2Q00722 1185 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 PPP2R3AQ06190 1150 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 CCINQ13939 588 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 SIM2Q14190 667 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-227ENST00000485102 WDR44Q5JSH3 913 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
HDAC6-227ENST00000485102 OVOS1Q6IE37 1185 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 HAUS6Q7Z4H7 955 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 ITIH5Q86UX2 942 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 LRRC3BQ96PB8 259 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 PGLYRP2Q96PD5 576 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 SEMA4GQ9NTN9 838 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 ODF2LQ9ULJ1 636 aa14.14□□□□□ -0.15
HDAC6-227ENST00000485102 TIMM13Q9Y5L4 95 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-227ENST00000485102 NUP210Q8TEM1 1887 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-227ENST00000485102 CCDC163A0A0D9SF12 145 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 SPECC1L-ADORA2AF8WAN1 911 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 OGTO15294 1046 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 OR4Q2P0C623 313 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 PLA2G4BP0C869 781 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 ABCD1P33897 745 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 TUFMP49411 452 aaKnown RBP14.13□□□□□ -0.15
HDAC6-227ENST00000485102 KPNA1P52294 538 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-227ENST00000485102 POU5F1Q01860 360 aaKnown RBP14.13□□□□□ -0.15
HDAC6-227ENST00000485102 SMARCB1Q12824 385 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 ENOX2Q16206 610 aaKnown RBP14.13□□□□□ -0.15
HDAC6-227ENST00000485102 TMEM119Q4V9L6 283 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 ARSHQ5FYA8 562 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 ARMCX5Q6P1M9 558 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 TXNDC11Q6PKC3 985 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 DSTYKQ6XUX3 929 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 ATAD1Q8NBU5 361 aa14.13□□□□□ -0.15
HDAC6-227ENST00000485102 DERAQ9Y315 318 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms