RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PCDHGA7Q9Y5G6 932 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA6Q9Y5G7 932 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA3Q9Y5H0 932 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA2Q9Y5H1 932 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 TAF6LQ9Y6J9 622 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 A6NLC8 198 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 KIAA0754O94854 1291 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CSPG5O95196 566 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 KRT1P04264 644 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 POU2F2P09086 479 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CKBP12277 381 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 IFNAR1P17181 557 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CALML3P27482 149 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PSMA5P28066 241 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ELF1P32519 619 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 SKOR1P84550 965 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 BEX3Q00994 111 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 DHCR24Q15392 516 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 HAUS3Q68CZ6 603 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 GDF6Q6KF10 455 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 POMZP3Q6PJE2 187 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF365Q70YC5 407 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CMTR2Q8IYT2 770 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 TBC1D21Q8IYX1 336 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF540Q8NDQ6 660 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 DEPTORQ8TB45 409 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC12Q8WUD4 166 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 KCNN1Q92952 543 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CUL5Q93034 780 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 SYAP1Q96A49 352 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 HIC2Q96JB3 615 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 AGAP3Q96P47 875 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ADPGKQ9BRR6 497 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 LGR4Q9BXB1 951 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PBX4Q9BYU1 374 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 BHMT2Q9H2M3 363 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 SENP2Q9HC62 589 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 MSRAQ9UJ68 235 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 GIT1Q9Y2X7 761 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 RWDD3Q9Y3V2 267 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 SPEF1Q9Y4P9 236 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 DENND4AQ7Z401 1863 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 IGLV3-22A0A075B6J6 115 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 A0A1W2PPH5 198 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 A0A1W2PQH9 124 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 GSTTP1A0A1W2PQM5 241 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 KPNA5O15131 536 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 GADD45BO75293 160 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 REC8O95072 547 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 LGALS2P05162 132 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 GOLGA8HP0CJ92 632 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ARAFP10398 606 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CSF2RAP15509 400 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 RECQLP46063 649 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ATXN1P54253 815 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ATN1P54259 1190 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 RAC1P63000 192 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 IL1RL1Q01638 556 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 C1QBPQ07021 282 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ORC2Q13416 577 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 RASA2Q15283 850 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PTGISQ16647 500 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 MAJINQ3KP22 176 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 TTC31Q49AM3 519 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 Q4G0T1 1027 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF362Q5T0B9 420 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 LRRC8DQ7L1W4 858 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZER1Q7Z7L7 766 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZBTB33Q86T24 672 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PTRH1Q86Y79 214 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 CEP97Q8IW35 865 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 FNIP1Q8TF40 1166 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 AFG1LQ8WV93 481 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 FERMT2Q96AC1 680 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF689Q96CS4 500 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 AIFM3Q96NN9 605 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 ZKSCAN3Q9BRR0 538 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 NIFKQ9BYG3 293 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 RABEP2Q9H5N1 569 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 MARK1Q9P0L2 795 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 COG5Q9UP83 839 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 SLC27A5Q9Y2P5 690 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 MTF2Q9Y483 593 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHA2Q9Y5H9 948 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 USP3Q9Y6I4 520 aa5.74□□□□□ -1.49
CCDC39-205ENST00000485055 A0A087WV62 115 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SMIM35A0A1B0GVV1 85 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC69A6NI79 296 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF891A8MT65 544 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 GIPC1O14908 333 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 DHX15O43143 795 aaKnown RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 SKAP2O75563 359 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 APBB3O95704 486 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 MYCP01106 439 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-205ENST00000485055 RB1P06400 928 aa5.73□□□□□ -1.49
CCDC39-205ENST00000485055 LINC00271P0C7V0 271 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms