RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ADAM22Q9P0K1 906 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 TRPV2Q9Y5S1 764 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 CDY2AQ9Y6F7 541 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 TARSL2A2RTX5 802 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 PGRMC1O00264 195 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 LSM8O95777 96 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 COMTP21964 271 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 HOXD10P28358 340 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 VSNL1P62760 191 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 TNNC1P63316 161 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 RPS6KC1Q96S38 1066 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 CNTN3Q9P232 1028 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 ANAPC7Q9UJX3 599 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 NOC2LQ9Y3T9 749 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 MIF4GDA9UHW6 222 aaKnown RBP17.79■□□□□ 0.44
CTSA-207ENST00000484855 HMGCRP04035 888 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 AKAP5P24588 427 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 APLP1P51693 650 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 KCNA10Q16322 511 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 C2CD6Q53TS8 623 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 CC2D1AQ6P1N0 951 aaPredicted RBP17.79■□□□□ 0.44
CTSA-207ENST00000484855 WDR93Q6P2C0 686 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 MMS22LQ6ZRQ5 1243 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 BEST2Q8NFU1 509 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 VCPIP1Q96JH7 1222 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 ZSWIM1Q9BR11 485 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.448e-8■■■□□ 15.3
CTSA-207ENST00000484855 ZNF446Q9NWS9 450 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 DNAH12Q6ZR08 3092 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 PAEPP09466 180 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 CD19P15391 556 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 CST5P28325 142 aaPredicted RBP17.79■□□□□ 0.44
CTSA-207ENST00000484855 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
CTSA-207ENST00000484855 MYO1EQ12965 1108 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 ALKAL1Q6UXT8 129 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 PHLDB2Q86SQ0 1253 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 RASGEF1CQ8N431 466 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 TFAP2BQ92481 460 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 CARD9Q9H257 536 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 PCDHGC3Q9UN70 934 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 CEP83Q9Y592 693 aa17.79■□□□□ 0.44
CTSA-207ENST00000484855 SPOPO43791 374 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 CILPO75339 1184 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 SEC31AO94979 1220 aaKnown RBP17.78■□□□□ 0.44
CTSA-207ENST00000484855 MCM3P25205 808 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 RAD23BP54727 409 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 DCAF12L1Q5VU92 463 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 LLGL2Q6P1M3 1020 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 SERINC5Q86VE9 423 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 TMEM35BQ8NCS4 154 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 C1orf131Q8NDD1 294 aaKnown RBP17.78■□□□□ 0.44
CTSA-207ENST00000484855 WNT8BQ93098 351 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 PARP2Q9UGN5 583 aa17.78■□□□□ 0.44
CTSA-207ENST00000484855 MED7O43513 233 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 ERLIN1O75477 346 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 CTSHP09668 335 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 ZBTB6Q15916 424 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 TWF2Q6IBS0 349 aaKnown RBP17.77■□□□□ 0.44
CTSA-207ENST00000484855 C8orf74Q6P047 294 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 SESTD1Q86VW0 696 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 WHAMMQ8TF30 809 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 UBE2Q2Q8WVN8 375 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 C18orf25Q96B23 403 aaPredicted RBP17.77■□□□□ 0.44
CTSA-207ENST00000484855 LRRC1Q9BTT6 524 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 ZNF518BQ9C0D4 1074 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 SCINQ9Y6U3 715 aa17.77■□□□□ 0.44
CTSA-207ENST00000484855 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.43
CTSA-207ENST00000484855 PTP4A2Q12974 167 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 ORC1Q13415 861 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.43
CTSA-207ENST00000484855 PCSK9Q8NBP7 692 aaKnown RBP17.77■□□□□ 0.43
CTSA-207ENST00000484855 ALG3Q92685 438 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 TWNKQ96RR1 684 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 MRPL47Q9HD33 250 aaKnown RBP17.77■□□□□ 0.43
CTSA-207ENST00000484855 KLK14Q9P0G3 267 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 UBQLN1Q9UMX0 589 aaKnown RBP17.77■□□□□ 0.43
CTSA-207ENST00000484855 IPPQ9Y573 584 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.43
CTSA-207ENST00000484855 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 RPLP2P05387 115 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 CALB1P05937 261 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 MMP8P22894 467 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 PTPN11Q06124 597 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 HNRNPLLQ8WVV9 542 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 KRT35Q92764 455 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 SENP6Q9GZR1 1112 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 ELOVL4Q9GZR5 314 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms