RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PCDHB1Q9Y5F3 818 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 A0A0B4J269 797 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 E7ENX8 843 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA12O60330 932 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 ZFPL1O95159 310 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 TTLL1O95922 423 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 GNAI2P04899 355 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 MALP21145 153 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 SLC6A4P31645 630 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
SMC4-215ENST00000484799 SOX10P56693 466 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 TAP2Q03519 686 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 TLE1Q04724 770 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 TUBB3Q13509 450 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 CCDC93Q567U6 631 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PEG10Q86TG7 708 aaKnown RBP5.41□□□□□ -1.54
SMC4-215ENST00000484799 ADGRG5Q8IZF4 528 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
SMC4-215ENST00000484799 Q8NA96 180 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 SCAMP4Q969E2 229 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 MRGPRX4Q96LA9 322 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 SIDT1Q9NXL6 827 aaKnown RBP5.41□□□□□ -1.54
SMC4-215ENST00000484799 SLC45A2Q9UMX9 530 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 ST3GAL5Q9UNP4 418 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA9Q9Y5G4 932 aaKnown RBP5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA8Q9Y5G5 932 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA7Q9Y5G6 932 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA6Q9Y5G7 932 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 PCDHGA3Q9Y5H0 932 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMC4-215ENST00000484799 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 WNT6Q9Y6F9 365 aa5.41□□□□□ -1.54
SMC4-215ENST00000484799 ZNF785A8K8V0 405 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 SOAT2O75908 522 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 SUN1O94901 812 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 GJB1P08034 283 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 ITGALP20701 1170 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 ABCG1P45844 678 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 POU6F2P78424 691 aaPredicted RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 SRSF4Q08170 494 aaKnown RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 FLYWCH1Q4VC44 716 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 SLC4A10Q6U841 1118 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 TMIEQ8NEW7 156 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 ZCRB1Q8TBF4 217 aaKnown RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 NTN5Q8WTR8 489 aaPredicted RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 LPIN2Q92539 896 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 TNPO1Q92973 898 aaKnown RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.54
SMC4-215ENST00000484799 SLC29A3Q9BZD2 475 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 CTTNBP2NLQ9P2B4 639 aa5.4□□□□□ -1.54
SMC4-215ENST00000484799 GABRDO14764 452 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 VPS4BO75351 444 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 MATN4O95460 622 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 CHEK2O96017 543 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 IBSPP21815 317 aaPredicted RBP5.39□□□□□ -1.55
SMC4-215ENST00000484799 MAPK10P53779 464 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 KRT85P78386 507 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 SNAPC2Q13487 334 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 KIAA1614Q5VZ46 1190 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 PTF1AQ7RTS3 328 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 PRPF38AQ8NAV1 312 aaKnown RBP5.39□□□□□ -1.55
SMC4-215ENST00000484799 FAM98AQ8NCA5 519 aaKnown RBP5.39□□□□□ -1.55
SMC4-215ENST00000484799 MYCBPAPQ8TBZ2 947 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 CNPPD1Q9BV87 410 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 KLC4Q9NSK0 619 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 RLIMQ9NVW2 624 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 PCDHA3Q9Y5H8 950 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 ENTPD2Q9Y5L3 495 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 RAD54BQ9Y620 910 aa5.39□□□□□ -1.55
SMC4-215ENST00000484799 LRRC3CA6NJW4 275 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 GCOM1H8Y6P7 765 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 F2RL2O00254 374 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 MGST3O14880 152 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 PROM1O43490 865 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 NR2F6P10588 404 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 PPP3CBP16298 524 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 NDUFB7P17568 137 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 EDNRBP24530 442 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 PHKA1P46020 1223 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 RECQLP46063 649 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 NDUFV1P49821 464 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 ZNF135P52742 658 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 EVA1CP58658 441 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 NHLH1Q02575 133 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 LAYNQ6UX15 382 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 FAM9AQ8IZU1 332 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 FAM177A1Q8N128 213 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 CPA6Q8N4T0 437 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 DDX17Q92841 729 aaKnown RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 TIMP4Q99727 224 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 ALG8Q9BVK2 526 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 PRDM13Q9H4Q3 707 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 KMT5AQ9NQR1 393 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
SMC4-215ENST00000484799 SPATA31A3Q5VYP0 1347 aa5.38□□□□□ -1.55
SMC4-215ENST00000484799 ADM5C9JUS6 153 aa5.37□□□□□ -1.55
SMC4-215ENST00000484799 SLC16A6O15403 523 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms