RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 GATA6Q92908 595 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 BRF1Q92994 677 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 MSANTD3Q96H12 275 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 ZSWIM4Q9H7M6 989 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 WRAP73Q9P2S5 460 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 VAV3Q9UKW4 847 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 A0A1B0GUA9 196 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 PRRG1O14668 218 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ZNF263O14978 683 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 B4GALT5O43286 388 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 SLC37A4O43826 429 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 LILRA1O75019 489 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 PAPSS2O95340 614 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 FCARP24071 287 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 CCNE1P24864 410 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 RELBQ01201 579 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 EPHA7Q15375 998 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ADCK5Q3MIX3 580 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 FAM78AQ5JUQ0 283 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 NCAPH2Q6IBW4 605 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 Q6ZUG5 572 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ANKS3Q6ZW76 656 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 CDR2LQ86X02 465 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 CSGALNACT1Q8TDX6 532 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ASAP3Q8TDY4 903 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ZCCHC14Q8WYQ9 949 aaKnown RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 FAM20AQ96MK3 541 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 CORO1BQ9BR76 489 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 NFKBIZQ9BYH8 718 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 ZNF334Q9HCZ1 680 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 TRPV5Q9NQA5 729 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 XPNPEP1Q9NQW7 623 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 PRMT7Q9NVM4 692 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-221ENST00000484566 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
DDX39B-221ENST00000484566 DOPEY1Q5JWR5 2465 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 ARHGEF37A1IGU5 675 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 N4BP3O15049 544 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 RECQL4O94761 1208 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 B3GAT3O94766 335 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 MICAL2O94851 1124 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 CHRNB1P11230 501 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 GCFC2P16383 781 aaKnown RBP9.38□□□□□ -0.91
DDX39B-221ENST00000484566 IFNAR1P17181 557 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 FGFR3P22607 806 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 CYP4A11Q02928 519 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 C19orf57Q0VDD7 668 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 CTTNQ14247 550 aaKnown RBP9.38□□□□□ -0.91
DDX39B-221ENST00000484566 SF3A2Q15428 464 aaKnown RBP9.38□□□□□ -0.91
DDX39B-221ENST00000484566 INF2Q27J81 1249 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 VITQ6UXI7 678 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 ZBTB8OSQ8IWT0 167 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 YAF2Q8IY57 180 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 BLIDQ8IZY5 108 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 SMARCD2Q92925 531 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 ADPGKQ9BRR6 497 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 KCNMB3Q9NPA1 279 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 LAMA1P25391 3075 aa9.38□□□□□ -0.91
DDX39B-221ENST00000484566 CCDC194A0A1B0GVG4 234 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 WDR27A2RRH5 827 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 K7ESF4 209 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 PTGESO14684 152 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 MAN1A2O60476 641 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 KRT38O76015 456 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 EPN2O95208 641 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 KCNK5O95279 499 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 ZNF806P0C7X5 589 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
DDX39B-221ENST00000484566 GLRA2P23416 452 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 TKTP29401 623 aaKnown RBP9.37□□□□□ -0.91
DDX39B-221ENST00000484566 PTGIRP43119 386 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 KPNA1P52294 538 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-221ENST00000484566 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-221ENST00000484566 ROR1Q01973 937 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 GAS6Q14393 721 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 NTRK3Q16288 839 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 PRSS36Q5K4E3 855 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 DGKKQ5KSL6 1271 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
DDX39B-221ENST00000484566 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms