RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 GJB1P08034 283 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 GNAI3P08754 354 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 TYRP14679 529 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 IL12RB1P42701 662 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 CLK3P49761 638 aaKnown RBP6.37□□□□□ -1.39
CCDC66-219ENST00000484441 EPHB1P54762 984 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 GNAI1P63096 354 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 NKX6-1P78426 367 aaPredicted RBP6.37□□□□□ -1.39
CCDC66-219ENST00000484441 DYRK1AQ13627 763 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 HLXQ14774 488 aaPredicted RBP6.37□□□□□ -1.39
CCDC66-219ENST00000484441 SLC17A8Q8NDX2 589 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 POC1BQ8TC44 478 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 PTCD3Q96EY7 689 aaKnown RBP6.37□□□□□ -1.39
CCDC66-219ENST00000484441 AIFM3Q96NN9 605 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 CDH19Q9H159 772 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 CASS4Q9NQ75 786 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 KMT5AQ9NQR1 393 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 ABCF2Q9UG63 623 aa6.37□□□□□ -1.39
CCDC66-219ENST00000484441 FEZ2Q9UHY8 353 aaPredicted RBP6.37□□□□□ -1.39
CCDC66-219ENST00000484441 SALL3Q9BXA9 1300 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 RARBP10826 455 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 SMARCA1P28370 1054 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 NANOS3P60323 173 aaKnown RBP6.36□□□□□ -1.39
CCDC66-219ENST00000484441 MC2RQ01718 297 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 TAPT1Q6NXT6 567 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 VWA1Q6PCB0 445 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 PPP1R32Q7Z5V6 425 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 ADGRG5Q8IZF4 528 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 TMEM125Q96AQ2 219 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 ZG16BQ96DA0 208 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 AIFM2Q9BRQ8 373 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 LMBRD1Q9NUN5 540 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 FOXJ2Q9P0K8 574 aa6.36□□□□□ -1.39
CCDC66-219ENST00000484441 SPATA31A3Q5VYP0 1347 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 ZNF785A8K8V0 405 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 OVOL3O00110 214 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 RFPL1O75677 317 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 BMP5P22003 454 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 GATA3P23771 443 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 RAB27AP51159 221 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 HABP2Q14520 560 aaPredicted RBP6.35□□□□□ -1.39
CCDC66-219ENST00000484441 ZNF169Q14929 603 aaPredicted RBP6.35□□□□□ -1.39
CCDC66-219ENST00000484441 EMC10Q5UCC4 262 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 MICALCLQ6ZW33 695 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 PPP1R3BQ86XI6 285 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 PDLIM2Q96JY6 352 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 TRIB1Q96RU8 372 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 MAP3K14Q99558 947 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 DMTF1Q9Y222 760 aa6.35□□□□□ -1.39
CCDC66-219ENST00000484441 ZAR1LA6NP61 321 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 ZNF135P52742 658 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 PSMC1P62191 440 aaKnown RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 SF3B3Q15393 1217 aaKnown RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 B3GNT9Q6UX72 402 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 SIMC1Q8NDZ2 872 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 DIS3LQ8TF46 1054 aaKnown RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 C1GALT1C1Q96EU7 318 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 SMOQ99835 787 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 CNPPD1Q9BV87 410 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 TINAGL1Q9GZM7 467 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 ZNF180Q9UJW8 692 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 AGAP1Q9UPQ3 857 aa6.34□□□□□ -1.39
CCDC66-219ENST00000484441 THRAP3Q9Y2W1 955 aaKnown RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-219ENST00000484441 SHROOM4Q9ULL8 1493 aa6.34□□□□□ -1.4
CCDC66-219ENST00000484441 OFD1O75665 1012 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 ALDH2P05091 517 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 FOLR3P41439 243 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 SIM1P81133 766 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 FPGSQ05932 587 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 PLS1Q14651 629 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 CD300EQ496F6 205 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 DNAJC10Q8IXB1 793 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 FAM98AQ8NCA5 519 aaKnown RBP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 JPH3Q8WXH2 748 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 SNX19Q92543 992 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 CDK5RAP3Q96JB5 506 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 SIK2Q9H0K1 926 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 MRPS18AQ9NVS2 196 aaKnown RBP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 PNPOQ9NVS9 261 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC66-219ENST00000484441 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
CCDC66-219ENST00000484441 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 TOR1BO14657 336 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 MGST3O14880 152 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 KIAA0355O15063 1070 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 MPPED1O15442 326 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 CXCR5P32302 372 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 RARRES1P49788 294 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 TOB1P50616 345 aaPredicted RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 ZNF267Q14586 743 aaPredicted RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 ERCC6LQ2NKX8 1250 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 NBPF8Q3BBV2 869 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 IFIT1BQ5T764 474 aaKnown RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 SLC30A5Q8TAD4 765 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms