RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-207ENST00000484275 SAP30BPQ9UHR5 308 aaKnown RBP5.88□□□□□ -1.47
SCAF11-207ENST00000484275 ST3GAL5Q9UNP4 418 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 AOX1Q06278 1338 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 CCDC154A6NI56 674 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 FZD9O00144 591 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 PREPLQ4J6C6 727 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-207ENST00000484275 TAPT1Q6NXT6 567 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 MICALCLQ6ZW33 695 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 SCARB1Q8WTV0 552 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 FAXDC2Q96IV6 333 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
SCAF11-207ENST00000484275 ADGRA2Q96PE1 1338 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 ORC4O43929 436 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 ERBB2P04626 1255 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 RHOP08100 348 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 LPOP22079 712 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-207ENST00000484275 POU6F2P78424 691 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-207ENST00000484275 EXOSC10Q01780 885 aaKnown RBP5.86□□□□□ -1.47
SCAF11-207ENST00000484275 HLXQ14774 488 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-207ENST00000484275 RAB39AQ14964 217 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 POC1BQ8TC44 478 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 HASPINQ8TF76 798 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 TRIB1Q96RU8 372 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 C1QTNF7Q9BXJ2 289 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 SLC29A3Q9BZD2 475 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 MRPS18AQ9NVS2 196 aaKnown RBP5.86□□□□□ -1.47
SCAF11-207ENST00000484275 PRKAB1Q9Y478 270 aa5.86□□□□□ -1.47
SCAF11-207ENST00000484275 CELA2AP08217 269 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 NPTX2P47972 431 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 SLC16A1P53985 500 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 ABCB5Q2M3G0 1257 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 EPHA10Q5JZY3 1008 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 EGFLAMQ63HQ2 1017 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 GADL1Q6ZQY3 521 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 PTF1AQ7RTS3 328 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 SMG7Q92540 1137 aaKnown RBP5.85□□□□□ -1.47
SCAF11-207ENST00000484275 COA7Q96BR5 231 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 CALCOCO1Q9P1Z2 691 aa5.85□□□□□ -1.47
SCAF11-207ENST00000484275 KLHL33A6NCF5 533 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 PRSS29PA6NIE9 313 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 E7ENX8 843 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 F2RL2O00254 374 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 ZNF81P51508 661 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-207ENST00000484275 TFF2Q03403 129 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 TAP2Q03519 686 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 PIGFQ07326 219 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 PCBP2Q15366 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCAF11-207ENST00000484275 FCRLBQ6BAA4 426 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 SLC30A10Q6XR72 485 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 NECAB2Q7Z6G3 386 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 RASAL3Q86YV0 1011 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 FAM9AQ8IZU1 332 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-207ENST00000484275 B3GALNT2Q8NCR0 500 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.47
SCAF11-207ENST00000484275 RFKQ969G6 155 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 TEKT5Q96M29 485 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 VRK1Q99986 396 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-207ENST00000484275 SMOC2Q9H3U7 446 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 KLC4Q9NSK0 619 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 MCM8Q9UJA3 840 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 WNT6Q9Y6F9 365 aa5.84□□□□□ -1.47
SCAF11-207ENST00000484275 WDR91A4D1P6 747 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 NT5C1B-RDH14C9J2C7 533 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 XPOTO43592 962 aaKnown RBP5.83□□□□□ -1.48
SCAF11-207ENST00000484275 PRKCGP05129 697 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 MYBL2P10244 700 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 MALP21145 153 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 SOX10P56693 466 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 NXPH1P58417 271 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 DSC2Q02487 901 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 ITIH3Q06033 890 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 SNAPC2Q13487 334 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 KHDC1Q4VXA5 237 aaKnown RBP5.83□□□□□ -1.48
SCAF11-207ENST00000484275 CCDC93Q567U6 631 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 HAPLN3Q96S86 360 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 CCDC8Q9H0W5 538 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-207ENST00000484275 ETAA1Q9NY74 926 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 DKK3Q9UBP4 350 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 ZNF70Q9UC06 446 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-207ENST00000484275 TRHDEQ9UKU6 1024 aa5.83□□□□□ -1.48
SCAF11-207ENST00000484275 A0A0B4J269 797 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 POLRMTO00411 1230 aaKnown RBP5.82□□□□□ -1.48
SCAF11-207ENST00000484275 CLSTN1O94985 981 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 TUBB3Q13509 450 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 PBKQ96KB5 322 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 SMOQ99835 787 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 ATP8A1Q9Y2Q0 1164 aa5.82□□□□□ -1.48
SCAF11-207ENST00000484275 LRRC14BA6NHZ5 514 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 KRTAP29-1A8MX34 341 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-207ENST00000484275 ANXA1P04083 346 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 NR2F6P10588 404 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 PCSK6P29122 969 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 PSMC1P62191 440 aaKnown RBP5.81□□□□□ -1.48
SCAF11-207ENST00000484275 MTMR1Q13613 665 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 ODF1Q14990 250 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 ZNF425Q6IV72 752 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms