RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SNRPFP62306 86 aaKnown RBP10.86□□□□□ -0.67
CPSF4-213ENST00000484112 ARHGAP8P85298 464 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 LMNB2Q03252 620 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 POSTNQ15063 836 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 L1TD1Q5T7N2 865 aaKnown RBP10.86□□□□□ -0.67
CPSF4-213ENST00000484112 POTEHQ6S545 545 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 UNC13DQ70J99 1090 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 CD302Q8IX05 232 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 DDX27Q96GQ7 796 aaKnown RBP10.86□□□□□ -0.67
CPSF4-213ENST00000484112 UROC1Q96N76 676 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 ACCSQ96QU6 501 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 EPC1Q9H2F5 836 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 BRD9Q9H8M2 597 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 GDE1Q9NZC3 331 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 RAB23Q9ULC3 237 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 BACE2Q9Y5Z0 518 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 FANCMQ8IYD8 2048 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 UBE4BO95155 1302 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 A0A0B4J269 797 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 A0A1B0GVL5 298 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 EIF3DO15371 548 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPSF4-213ENST00000484112 TRAPPC3O43617 180 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
CPSF4-213ENST00000484112 TBC1D4O60343 1298 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 POU2F2P09086 479 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 CLTAP09496 248 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 KCNE1P15382 129 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 NMT1P30419 496 aaKnown RBP10.85□□□□□ -0.67
CPSF4-213ENST00000484112 RPS9P46781 194 aaKnown RBP10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ASIC1P78348 528 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 EHHADHQ08426 723 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 PSMD2Q13200 908 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 FZD5Q13467 585 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 CD300LGQ6UXG3 332 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 PRR23BQ6ZRT6 265 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ELSPBP1Q96BH3 223 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 TCEAL4Q96EI5 215 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 TRMT61BQ9BVS5 477 aaKnown RBP10.85□□□□□ -0.67
CPSF4-213ENST00000484112 LMAN1LQ9HAT1 526 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 CYP4F11Q9HBI6 524 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ZFP14Q9HCL3 533 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 PARD6AQ9NPB6 346 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 CNTN3Q9P232 1028 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 ANKFY1Q9P2R3 1169 aa10.85□□□□□ -0.67
CPSF4-213ENST00000484112 TMEM189-UBE2V1I3L0A0 370 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 OGTO15294 1046 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 XPOTO43592 962 aaKnown RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 GCNT3O95395 438 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 LDHAP00338 332 aaKnown RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 ADRB2P07550 413 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 GARTP22102 1010 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 PAX3P23760 479 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 MATR3P43243 847 aaKnown RBP eCLIP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 OSTNP61366 133 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 ROR1Q01973 937 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 UPP1Q16831 310 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 FAM78AQ5JUQ0 283 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 CYP4A22Q5TCH4 519 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 ELOA2Q8IYF1 753 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 FSIP1Q8NA03 581 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 C3orf58Q8NDZ4 430 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 ZNF461Q8TAF7 563 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 FAM3CQ92520 227 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 NELL1Q92832 810 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 DNASE1L2Q92874 299 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 CCDC47Q96A33 483 aaKnown RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 PAGE5Q96GU1 130 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 PPP1R10Q96QC0 940 aaKnown RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 RTKNQ9BST9 563 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 PRMT8Q9NR22 394 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 CGNQ9P2M7 1197 aaKnown RBP10.84□□□□□ -0.67
CPSF4-213ENST00000484112 VPS13AQ96RL7 3174 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 OTOGLQ3ZCN5 2332 aa10.84□□□□□ -0.67
CPSF4-213ENST00000484112 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ARHGEF37A1IGU5 675 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 WDR27A2RRH5 827 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 SHISA7A6NL88 538 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF197O14709 1029 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 FAM189A1O60320 539 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 KIF20AO95235 890 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 SEC24AO95486 1093 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 MYL4P12829 197 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 GJA1P17302 382 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 CYP3A5P20815 502 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 KCNA4P22459 653 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 TGM1P22735 817 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 GDI1P31150 447 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 RPL9P32969 192 aaKnown RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 NDUFA8P51970 172 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms