RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SPTLC1O15269 473 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 SPTLC2O15270 562 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 GFRA3O60609 400 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 GCNT3O95395 438 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 VNN2O95498 520 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 YEATS4O95619 227 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 IDEP14735 1019 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 TAF6P49848 677 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 SMARCB1Q12824 385 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 SLC44A4Q53GD3 710 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 CENPPQ6IPU0 288 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 ARMCX5Q6P1M9 558 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 TMEM130Q8N3G9 435 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 PJA1Q8NG27 643 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 DNASE1L2Q92874 299 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 ZFP14Q9HCL3 533 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 PANK4Q9NVE7 773 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 F5P12259 2224 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 CACNA1IQ9P0X4 2223 aa21.47■■□□□ 1.03
HPS4-213ENST00000483631 A0A087X0B3 334 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 KANSL1LA0AUZ9 987 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 KIAA0391O15091 583 aaKnown RBP21.46■■□□□ 1.03
HPS4-213ENST00000483631 PNPLA4P41247 253 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 CCR2P41597 374 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 MAGEA9P43362 315 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 EPHB3P54753 998 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 STXBP4Q6ZWJ1 553 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 BRSK2Q8IWQ3 736 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 CCDC65Q8IXS2 484 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 TCEAL4Q96EI5 215 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 ZNF560Q96MR9 790 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 ASB16Q96NS5 453 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 TRPV4Q9HBA0 871 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
HPS4-213ENST00000483631 MTMR11A4FU01 709 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 MOSPD3O75425 235 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 FCARP24071 287 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 ALDH1A3P47895 512 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 KCNA1Q09470 495 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 DUSP4Q13115 394 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 SV2CQ496J9 727 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 TANGO2Q6ICL3 276 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 CNNM4Q6P4Q7 775 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 POTEHQ6S545 545 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 METTL23Q86XA0 190 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 EFCAB13Q8IY85 973 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 ST13P5Q8NFI4 369 aaPredicted RBP21.45■■□□□ 1.02
HPS4-213ENST00000483631 C2orf15Q8WU43 125 aaKnown RBP21.45■■□□□ 1.02
HPS4-213ENST00000483631 SMARCD2Q92925 531 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 E2F7Q96AV8 911 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 NELL2Q99435 816 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 LRRC3Q9BY71 257 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 TRPV5Q9NQA5 729 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 KBTBD4Q9NVX7 518 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 FANCMQ8IYD8 2048 aa21.45■■□□□ 1.02
HPS4-213ENST00000483631 USP34Q70CQ2 3546 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 CUTAO60888 179 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 FGF19O95750 216 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 OR4Q2P0C623 313 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 TUFMP49411 452 aaKnown RBP21.44■■□□□ 1.02
HPS4-213ENST00000483631 AMPD3Q01432 767 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 SNW1Q13573 536 aaKnown RBP21.44■■□□□ 1.02
HPS4-213ENST00000483631 E2F4Q16254 413 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 FAM78AQ5JUQ0 283 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 ATL3Q6DD88 541 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 HS6ST3Q8IZP7 471 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 SYCP3Q8IZU3 236 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 THEM5Q8N1Q8 247 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 CACTINQ8WUQ7 758 aaKnown RBP21.44■■□□□ 1.02
HPS4-213ENST00000483631 DEPDC1BQ8WUY9 529 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 BORCS6Q96GS4 357 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 PGLYRP2Q96PD5 576 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 ZCWPW1Q9H0M4 648 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 DNAJC25Q9H1X3 360 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 CRISPLD1Q9H336 500 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 SEMA4AQ9H3S1 761 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 TBC1D7Q9P0N9 293 aa21.44■■□□□ 1.02
HPS4-213ENST00000483631 CYB561D2O14569 222 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 EXTL3O43909 919 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 CASP5P51878 434 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 ITIH5Q86UX2 942 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 TMC8Q8IU68 726 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 HSCBQ8IWL3 235 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 PDILTQ8N807 584 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 IQUBQ8NA54 791 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 OR10T2Q8NGX3 314 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 NKD2Q969F2 451 aaPredicted RBP21.43■■□□□ 1.02
HPS4-213ENST00000483631 PSMG2Q969U7 264 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 FAM213AQ9BRX8 229 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 PLA2G2FQ9BZM2 168 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 FOXQ1Q9C009 403 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 IKZF4Q9H2S9 585 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 MAGEF1Q9HAY2 307 aa21.43■■□□□ 1.02
HPS4-213ENST00000483631 PRR23AA6NEV1 266 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 KPNA7A9QM74 516 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 DCNP07585 359 aaKnown RBP21.42■■□□□ 1.02
HPS4-213ENST00000483631 MYL4P12829 197 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 PSMC3P17980 439 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 C1orf210Q8IVY1 113 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms