RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 C8AP07357 584 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 WEE2P0C1S8 567 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 ATF2P15336 505 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 CLDN10P78369 228 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 RBP5P82980 135 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-225ENST00000483506 LMBRD2Q68DH5 695 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-225ENST00000483506 OVOS1Q6IE37 1185 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 CCDC149Q6ZUS6 474 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 USP37Q86T82 979 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 SMARCE1Q969G3 411 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 FNBP1Q96RU3 617 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 GDAP2Q9NXN4 497 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 AGAP1Q9UPQ3 857 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 TIMM13Q9Y5L4 95 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-225ENST00000483506 CYB561D2O14569 222 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 TNNC2P02585 160 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 SSTR3P32745 418 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-225ENST00000483506 EDRF1Q3B7T1 1238 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 SCARA3Q6AZY7 606 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 TCEAL8Q8IYN2 117 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 PLEKHO2Q8TD55 490 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 PARD3BQ8TEW8 1205 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 WDR6Q9NNW5 1121 aaKnown RBP19.4■□□□□ 0.7
HDAC6-225ENST00000483506 AFF4Q9UHB7 1163 aaKnown RBP19.4■□□□□ 0.7
HDAC6-225ENST00000483506 MAPK8IP1Q9UQF2 711 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 USTQ9Y2C2 406 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 NR2E1Q9Y466 385 aa19.4■□□□□ 0.7
HDAC6-225ENST00000483506 DLATP10515 647 aaKnown RBP19.39■□□□□ 0.69
HDAC6-225ENST00000483506 MCCD1P59942 119 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-225ENST00000483506 ENPEPQ07075 957 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 PPM1LQ5SGD2 360 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 TRAPPC11Q7Z392 1133 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 SMYD4Q8IYR2 804 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-225ENST00000483506 SLC7A14Q8TBB6 771 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 SPATA18Q8TC71 538 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 SMG7Q92540 1137 aaKnown RBP19.39■□□□□ 0.69
HDAC6-225ENST00000483506 CCDC127Q96BQ5 260 aa19.39■□□□□ 0.69
HDAC6-225ENST00000483506 TNNI1P19237 187 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 NR2F2P24468 414 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 PRCPP42785 496 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 CASP4P49662 377 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 AP3M2P53677 418 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 GPR17Q13304 367 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 WSCD1Q658N2 575 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 LIMS2Q7Z4I7 341 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 TMC2Q8TDI7 906 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 ZNF516Q92618 1163 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-225ENST00000483506 RPGRIP1Q96KN7 1286 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
HDAC6-225ENST00000483506 RTP3Q9BQQ7 232 aa19.38■□□□□ 0.69
HDAC6-225ENST00000483506 CLUHO75153 1309 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 LRRIQ3A6PVS8 624 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-225ENST00000483506 VNN2O95498 520 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
HDAC6-225ENST00000483506 KRT19P08727 400 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 CPB1P15086 417 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 RPL13P26373 211 aaKnown RBP19.37■□□□□ 0.69
HDAC6-225ENST00000483506 MYO1EQ12965 1108 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 CENPPQ6IPU0 288 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 METTL23Q86XA0 190 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 ZC3H3Q8IXZ2 948 aaKnown RBP19.37■□□□□ 0.69
HDAC6-225ENST00000483506 ADSSL1Q8N142 457 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 TMEM86AQ8N2M4 240 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 PDCL2Q8N4E4 241 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 TOP6BLQ8N6T0 577 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 OR10T2Q8NGX3 314 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 KHSRPQ92945 711 aaKnown RBP eCLIP19.37■□□□□ 0.69
HDAC6-225ENST00000483506 MAN1B1Q9UKM7 699 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 L1RE1Q9UN81 338 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 FRMD4BQ9Y2L6 1034 aa19.37■□□□□ 0.69
HDAC6-225ENST00000483506 DOCK8Q8NF50 2099 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 DOCK6Q96HP0 2047 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 C2CD4DB7Z1M9 353 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 XYLBO75191 536 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 AKAP3O75969 853 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 SEC24AO95486 1093 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 ARPP19P56211 112 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 ADCY1Q08828 1119 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 BFSP1Q12934 665 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 RNF19BQ6ZMZ0 732 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 DPH6Q7L8W6 267 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 RNF135Q8IUD6 432 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 ZDHHC14Q8IZN3 488 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 HPDLQ96IR7 371 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 ZCWPW1Q9H0M4 648 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 HSFX1Q9UBD0 423 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 INSL5Q9Y5Q6 135 aa19.36■□□□□ 0.69
HDAC6-225ENST00000483506 NOTCH4Q99466 2003 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 PI4K2BG5E9Z4 385 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 TULP1O00294 542 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-225ENST00000483506 IKBKBO14920 756 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 HUS1O60921 280 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 OR4Q2P0C623 313 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 ELF1P32519 619 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 PPP1R2P41236 205 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 MORC3Q14149 939 aa19.35■□□□□ 0.69
HDAC6-225ENST00000483506 C1orf220Q5T0J3 134 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms