RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 SARM1Q6SZW1 724 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 COLGALT1Q8NBJ5 622 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 ELMO3Q96BJ8 720 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 PCDHB12Q9Y5F1 795 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 TRIM66O15016 1216 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 AP5Z1O43299 807 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 ASS1P00966 412 aaKnown RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 ITGB1P05556 798 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 SLC9A1P19634 815 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 PON1P27169 355 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 LRMPQ12912 555 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 ZNF699Q32M78 642 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 SV2CQ496J9 727 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 LMO3Q8TAP4 145 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 PCMTD1Q96MG8 357 aaPredicted RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 GRPEL1Q9HAV7 217 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 CARNS1A5YM72 827 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 ANKRD33BA6NCL7 494 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
HPS4-212ENST00000481910 SYCP1Q15431 976 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 RAB30Q15771 203 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 ZNF667Q5HYK9 610 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 TAF4BQ92750 862 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 ERGIC2Q96RQ1 377 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 SPG21Q9NZD8 308 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
HPS4-212ENST00000481910 ADAM28Q9UKQ2 775 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 SNX9Q9Y5X1 595 aa12.42□□□□□ -0.42
HPS4-212ENST00000481910 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 SPTLC1O15269 473 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 TRAPPC3O43617 180 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 STAU1O95793 577 aaKnown RBP12.41□□□□□ -0.42
HPS4-212ENST00000481910 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 BRCC3P46736 316 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 TIGD5Q53EQ6 642 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 TMEM173Q86WV6 379 aaPredicted RBP12.41□□□□□ -0.42
HPS4-212ENST00000481910 TATDN2Q93075 761 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 NT5C1BQ96P26 610 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 KIAA1671Q9BY89 1806 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 A0A1W2PPC1 479 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 I3L4J1 428 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 PAX3P23760 479 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 PPM1AP35813 382 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 BMPR1AP36894 532 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 KLK7P49862 253 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 TNNC1P63316 161 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 APBA1Q02410 837 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 TMEM169Q96HH4 297 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 VRTNQ9H8Y1 702 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 APOBEC3GQ9HC16 384 aaKnown RBP12.41□□□□□ -0.42
HPS4-212ENST00000481910 FAM207AQ9NSI2 230 aaPredicted RBP12.41□□□□□ -0.42
HPS4-212ENST00000481910 MARCH5Q9NX47 278 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 GDAP2Q9NXN4 497 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 RPS6KL1Q9Y6S9 549 aa12.41□□□□□ -0.42
HPS4-212ENST00000481910 NLRC5Q86WI3 1866 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 A0A1W2PQC6 194 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 CYB561D2O14569 222 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 TPD52L2O43399 206 aaKnown RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 ARHGEF15O94989 841 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 P4HA1P13674 534 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 CTNNB1P35222 781 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 TAP1Q03518 808 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 KRT17Q04695 432 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
HPS4-212ENST00000481910 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 FUT10Q6P4F1 479 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 CACTIN-AS1Q8N1I8 211 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
HPS4-212ENST00000481910 BCL7CQ8WUZ0 217 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms