RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 NFIL3Q16649 462 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CEP135Q66GS9 1140 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CENPPQ6IPU0 288 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 ELMO3Q96BJ8 720 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 BORCS6Q96GS4 357 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 MED15Q96RN5 788 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CGRRF1Q99675 332 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CLSTN3Q9BQT9 956 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 TTPALQ9BTX7 342 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 TIMM13Q9Y5L4 95 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 SPTBN2O15020 2390 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CFAP47Q6ZTR5 3102 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 ACACBO00763 2458 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 M0QZQ0 153 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 XPOTO43592 962 aaKnown RBP11.42□□□□□ -0.58
SSBP1-210ENST00000481508 KRT37O76014 449 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 SPATA31D3P0C874 917 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 NR2F2P24468 414 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 STX17P56962 302 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 LILRA4P59901 499 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 FOXK2Q01167 660 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 TCF15Q12870 199 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 PSMD5Q16401 504 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 LEXMQ3ZCV2 418 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
SSBP1-210ENST00000481508 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 KIAA1841Q6NSI8 718 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 SYCE2Q6PIF2 218 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 SPATA31D4Q6ZUB0 917 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 ZC3H3Q8IXZ2 948 aaKnown RBP11.42□□□□□ -0.58
SSBP1-210ENST00000481508 C12orf76Q8N812 135 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-210ENST00000481508 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 MSLNLQ96KJ4 702 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
SSBP1-210ENST00000481508 APOL5Q9BWW9 433 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 NUP62CLQ9H1M0 184 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 KIAA1586Q9HCI6 787 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
SSBP1-210ENST00000481508 GRXCR2A6NFK2 248 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TBC1D4O60343 1298 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 KIF20AO95235 890 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 CST3P01034 146 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TMEM191BP0C7N4 346 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TRIM49P0CI25 452 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TRIM49CP0CI26 452 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 KLRC2P26717 231 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 NDUFV1P49821 464 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
SSBP1-210ENST00000481508 BFSP1Q12934 665 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 ADAM9Q13443 819 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 MRPL58Q14197 206 aaKnown RBP11.41□□□□□ -0.58
SSBP1-210ENST00000481508 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TDRD10Q5VZ19 366 aaKnown RBP11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TTI2Q6NXR4 508 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 NT5DC4Q86YG4 428 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 WDR49Q8IV35 697 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 CSGALNACT2Q8N6G5 542 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 PARD3BQ8TEW8 1205 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 NELFBQ8WX92 580 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 SENP8Q96LD8 212 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TMEM209Q96SK2 561 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 CDCA3Q99618 268 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-210ENST00000481508 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 STK39Q9UEW8 545 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 PTPRDP23468 1912 aa11.41□□□□□ -0.58
SSBP1-210ENST00000481508 TGM5O43548 720 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 HCRTO43612 131 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 LRRN2O75325 713 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 VNN1O95497 513 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 VNN2O95498 520 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 TNNC2P02585 160 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 C4BPAP04003 597 aaKnown RBP11.4□□□□□ -0.58
SSBP1-210ENST00000481508 KRT19P08727 400 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 OR4Q2P0C623 313 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 TNNI1P19237 187 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 CCNE1P24864 410 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 TAF6P49848 677 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 CDR1P51861 262 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 CLDN10P78369 228 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 ZP2Q05996 745 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 PPP3CAQ08209 521 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
SSBP1-210ENST00000481508 ANKRD54Q6NXT1 300 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms