RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
HSPG2-209ENST00000480900 AVENQ9NQS1 362 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-209ENST00000480900 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
HSPG2-209ENST00000480900 HCFC1R1Q9NWW0 138 aa18.37■□□□□ 0.53
HSPG2-209ENST00000480900 HSPBP1Q9NZL4 362 aa18.37■□□□□ 0.53
HSPG2-209ENST00000480900 DNMT3BQ9UBC3 853 aaKnown RBP18.37■□□□□ 0.53
HSPG2-209ENST00000480900 CDH7Q9ULB5 785 aa18.37■□□□□ 0.53
HSPG2-209ENST00000480900 ZNF233A6NK53 670 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 TGFB1I1O43294 461 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 KLRC4O43908 158 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 GPR17Q13304 367 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 SURF1Q15526 300 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 HS2ST1Q7LGA3 356 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
HSPG2-209ENST00000480900 C1orf127Q8N9H9 656 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 SLC39A2Q9NP94 309 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 CGNQ9P2M7 1197 aaKnown RBP18.36■□□□□ 0.53
HSPG2-209ENST00000480900 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
HSPG2-209ENST00000480900 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 ANHXE9PGG2 379 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 CYB561D2O14569 222 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 RHOP08100 348 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 OR4Q2P0C623 313 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 PTPN2P17706 415 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 SYKP43405 635 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 HTR4Q13639 388 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 METTL23Q86XA0 190 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 CBWD2Q8IUF1 395 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 ITFG1Q8TB96 612 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 FGF13Q92913 245 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 BORCS6Q96GS4 357 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 PIEZO1Q92508 2521 aa18.35■□□□□ 0.53
HSPG2-209ENST00000480900 VNN2O95498 520 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 ITGB3P05106 788 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 TMEM191BP0C7N4 346 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 POLR2BP30876 1174 aaKnown RBP18.34■□□□□ 0.53
HSPG2-209ENST00000480900 NDUFA8P51970 172 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 PSMD2Q13200 908 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 KNOP1Q1ED39 458 aaKnown RBP18.34■□□□□ 0.53
HSPG2-209ENST00000480900 C12orf56Q8IXR9 622 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 ELMOD1Q8N336 334 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 CXorf38Q8TB03 319 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 RSAD2Q8WXG1 361 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 KCNH6Q9H252 994 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 AGAP1Q9UPQ3 857 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 MRPS23Q9Y3D9 190 aaKnown RBP18.34■□□□□ 0.53
HSPG2-209ENST00000480900 WDFY4Q6ZS81 3184 aa18.34■□□□□ 0.53
HSPG2-209ENST00000480900 DENND4CQ5VZ89 1909 aa18.33■□□□□ 0.53
HSPG2-209ENST00000480900 MTMR11A4FU01 709 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 TULP1O00294 542 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-209ENST00000480900 NUCB2P80303 420 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 TWF1Q12792 350 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 SNRNP35Q16560 246 aaKnown RBP18.33■□□□□ 0.52
HSPG2-209ENST00000480900 SLC5A9Q2M3M2 681 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 WSCD1Q658N2 575 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 MTSS1LQ765P7 747 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 NPAS3Q8IXF0 933 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 SLC44A3Q8N4M1 653 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 CSGALNACT2Q8N6G5 542 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 FSIP1Q8NA03 581 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 OR10T2Q8NGX3 314 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 GOLGA5Q8TBA6 731 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 ANKRD36BP1Q96IX9 119 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 PGLYRP2Q96PD5 576 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 CORO1BQ9BR76 489 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 HSFX1Q9UBD0 423 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 SIX4Q9UIU6 781 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
HSPG2-209ENST00000480900 CLIC2O15247 247 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 MICAL2O94851 1124 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 PDGFBP01127 241 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-209ENST00000480900 TNNC2P02585 160 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 CYP2J2P51589 502 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 RBP5P82980 135 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 PLD1Q13393 1074 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 CENPPQ6IPU0 288 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 LEMD2Q8NC56 503 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 KIAA0895Q8NCT3 520 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 ZNF512Q96ME7 567 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-209ENST00000480900 TMEM209Q96SK2 561 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 RTP3Q9BQQ7 232 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 GDE1Q9NZC3 331 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 CEP72Q9P209 647 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms