RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 POMGNT1Q8WZA1 660 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 SMARCD2Q92925 531 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 ZSWIM3Q96MP5 696 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 TRMT61BQ9BVS5 477 aaKnown RBP16.52■□□□□ 0.24
LIMS3-203ENST00000480744 IKZF4Q9H2S9 585 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 CRISPLD1Q9H336 500 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 COL4A2P08572 1712 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 MOSPD3O75425 235 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 SYT1P21579 422 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 TARSP26639 723 aaKnown RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 VIPR2P41587 438 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 CDR1P51861 262 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 MYBPC2Q14324 1141 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ZC3H14Q6PJT7 736 aaKnown RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ZNF852Q6ZMS4 543 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ATAD1Q8NBU5 361 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ZSCAN18Q8TBC5 510 aaPredicted RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 DNASE1L2Q92874 299 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 TMEM209Q96SK2 561 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ST6GALNAC4Q9H4F1 302 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 ASB7Q9H672 318 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 DERAQ9Y315 318 aa16.51■□□□□ 0.23
LIMS3-203ENST00000480744 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
LIMS3-203ENST00000480744 NUP210Q8TEM1 1887 aaPredicted RBP16.5■□□□□ 0.23
LIMS3-203ENST00000480744 ZNF638Q14966 1978 aaKnown RBP16.5■□□□□ 0.23
LIMS3-203ENST00000480744 A0A1W2PRU2 124 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 MYMKA6NI61 221 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 PIRO00625 290 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 SOAT2O75908 522 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 GDI1P31150 447 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 EPHA5P54756 1037 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 VITQ6UXI7 678 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 ZNF720Q7Z2F6 126 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 SHKBP1Q8TBC3 707 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 HVCN1Q96D96 273 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 PANK2Q9BZ23 570 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 SEMA4AQ9H3S1 761 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 DPP3Q9NY33 737 aa16.5■□□□□ 0.23
LIMS3-203ENST00000480744 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
LIMS3-203ENST00000480744 MRPS17Q9Y2R5 130 aaKnown RBP16.5■□□□□ 0.23
LIMS3-203ENST00000480744 NCAM2O15394 837 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 IDEP14735 1019 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 GAP43P17677 238 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 PSMC3P17980 439 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 PAX3P23760 479 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 TAF6P49848 677 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
LIMS3-203ENST00000480744 SLC39A12Q504Y0 691 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 METTL23Q86XA0 190 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 TMC8Q8IU68 726 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 GPIHBP1Q8IV16 184 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 MAML2Q8IZL2 1156 aaPredicted RBP16.49■□□□□ 0.23
LIMS3-203ENST00000480744 OR10T2Q8NGX3 314 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
LIMS3-203ENST00000480744 IRF7Q92985 503 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 ACCSQ96QU6 501 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 NELL2Q99435 816 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 SEPT5Q99719 369 aaPredicted RBP16.49■□□□□ 0.23
LIMS3-203ENST00000480744 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
LIMS3-203ENST00000480744 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 EXOC7Q9UPT5 735 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 STYXL1Q9Y6J8 313 aa16.49■□□□□ 0.23
LIMS3-203ENST00000480744 KIF26AQ9ULI4 1882 aaPredicted RBP16.48■□□□□ 0.23
LIMS3-203ENST00000480744 GVINP1Q7Z2Y8 2422 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 F5P12259 2224 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 CYB561D2O14569 222 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 ZNF263O14978 683 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 GCNT3O95395 438 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 STAT6P42226 847 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 MAGEA9P43362 315 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 KCNA1Q09470 495 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 POSTNQ15063 836 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 YAF2Q8IY57 180 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 EFCAB13Q8IY85 973 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 SYCP3Q8IZU3 236 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 DEPDC1BQ8WUY9 529 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 DNAJC19Q96DA6 116 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 SAAL1Q96ER3 474 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 FAM213AQ9BRX8 229 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 LRRC3Q9BY71 257 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms