RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 LARSQ9P2J5 1176 aaKnown RBP5.4□□□□□ -1.54
PTCD3-213ENST00000480102 SEL1LQ9UBV2 794 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 GPN3Q9UHW5 284 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-213ENST00000480102 GIT1Q9Y2X7 761 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 PCDHB7Q9Y5E2 793 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ATP6V1DQ9Y5K8 247 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 TANC1Q9C0D5 1861 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MCM3APO60318 1980 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 A0A087WZ62 844 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 FAM237AA0A1B0GTK4 181 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 TSPAN1O60635 241 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 EFEMP2O95967 443 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 TGFB1P01137 390 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PIGRP01833 764 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MYL1P05976 194 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PLS3P13797 630 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 FOSL2P15408 326 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PROZP22891 400 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 GSTT1P30711 240 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 UBA7P41226 1012 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 SLC12A3P55017 1021 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 GUCY1B3Q02153 619 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CYP4A11Q02928 519 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MBTD1Q05BQ5 628 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PPP2R3AQ06190 1150 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 DMP1Q13316 513 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 DRP2Q13474 957 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 ALCAMQ13740 583 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CAPSQ13938 189 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 BTG3Q14201 252 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CTTNQ14247 550 aaKnown RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 HSP90AA2PQ14568 343 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MAPK6Q16659 721 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 DCAF4L1Q3SXM0 396 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 EPC2Q52LR7 807 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 XKR4Q5GH76 650 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 RINT1Q6NUQ1 792 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CDPF1Q6NVV7 123 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 SLC27A1Q6PCB7 646 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CCDC73Q6ZRK6 1079 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 ZBTB8OSQ8IWT0 167 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 LINC00301Q8NCQ3 95 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MAFAQ8NHW3 353 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 EZH1Q92800 747 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 GJA10Q969M2 543 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CALML4Q96GE6 196 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 IFT74Q96LB3 600 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CCDC43Q96MW1 224 aaKnown RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 ZNF396Q96N95 335 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CASD1Q96PB1 797 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 OSBPL7Q9BZF2 842 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 BHMT2Q9H2M3 363 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 NKX2-4Q9H2Z4 354 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 PTPRHQ9HD43 1115 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 NGRNQ9NPE2 291 aaKnown RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 OLFML3Q9NRN5 406 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 RAD18Q9NS91 495 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CCDC39Q9UFE4 941 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 FBXO2Q9UK22 296 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-213ENST00000480102 RCOR1Q9UKL0 485 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 CFAP45Q9UL16 551 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 TNFSF13BQ9Y275 285 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 MTCH2Q9Y6C9 303 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 TRANK1O15050 2925 aa5.39□□□□□ -1.55
PTCD3-213ENST00000480102 UNC80Q8N2C7 3258 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 FAM95CA0A1B0GW59 222 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM189-UBE2V1I3L0A0 370 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 GIPC1O14908 333 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 N4BP3O15049 544 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 KIAA0391O15091 583 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 HYAL3O43820 417 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 MGEA5O60502 916 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 ERLIN2O94905 339 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 ADRB2P07550 413 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 POU2F2P09086 479 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 GSTP1P09211 210 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PLA2G4BP0C869 781 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 ATF7P17544 494 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 ATP2B1P20020 1258 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 VAMP1P23763 118 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 CDC25AP30304 524 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 NCKAP1LP55160 1127 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 SNRPFP62306 86 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 GTF2BQ00403 316 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 DSC1Q08554 894 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 MAPK7Q13164 816 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms