RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 MSRAQ9UJ68 235 aa10.32□□□□□ -0.76
CD46-214ENST00000480003 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 M0QZQ0 153 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 PHACTR2O75167 634 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TADA2AO75478 443 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 B3GAT3O94766 335 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 ITGB1P05556 798 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 CA3P07451 260 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 KRT19P08727 400 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SLC9A1P19634 815 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 PON1P27169 355 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 PBX3P40426 434 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 PNPLA4P41247 253 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TAF6P49848 677 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 UBASH3AP57075 661 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 COPS2P61201 443 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 BIRC3Q13489 604 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TRPC3Q13507 836 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TIGD5Q53EQ6 642 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 SARM1Q6SZW1 724 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SPRED2Q7Z698 418 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 DDX53Q86TM3 631 aaKnown RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 TMEM173Q86WV6 379 aaPredicted RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 BCL7CQ8WUZ0 217 aaPredicted RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 HPDLQ96IR7 371 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SUSD3Q96L08 255 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SAMD11Q96NU1 681 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 ERGIC2Q96RQ1 377 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 C17orf80Q9BSJ5 609 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 CRACR2AQ9BSW2 395 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 GPR62Q9BZJ7 368 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 NKX2-4Q9H2Z4 354 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SPG21Q9NZD8 308 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 ADAM28Q9UKQ2 775 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SIK3Q9Y2K2 1263 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 PRG3Q9Y2Y8 225 aaPredicted RBP10.31□□□□□ -0.76
CD46-214ENST00000480003 RWDD3Q9Y3V2 267 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 NUB1Q9Y5A7 615 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 PCDHB12Q9Y5F1 795 aa10.31□□□□□ -0.76
CD46-214ENST00000480003 SCN1AP35498 2009 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 KPNA7A9QM74 516 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 SOX1O00570 391 aaPredicted RBP10.3□□□□□ -0.76
CD46-214ENST00000480003 KIF4AO95239 1232 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 SERPINC1P01008 464 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 TPM2P07951 284 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 FECHP22830 423 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 PBX1P40424 430 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 BRCC3P46736 316 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 CETN1Q12798 172 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 MRPL58Q14197 206 aaKnown RBP10.3□□□□□ -0.76
CD46-214ENST00000480003 EXOC3L4Q17RC7 722 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 FILIP1LQ4L180 1135 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 DPH6Q7L8W6 267 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 TAS1R1Q7RTX1 841 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 KLHL23Q8NBE8 558 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 ELMO3Q96BJ8 720 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 SENP8Q96LD8 212 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 ZNF560Q96MR9 790 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 PI4K2AQ9BTU6 479 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 VN1R3Q9BXE9 311 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 CHST7Q9NS84 486 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 IFNKQ9P0W0 207 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 LZTS1Q9Y250 596 aa10.3□□□□□ -0.76
CD46-214ENST00000480003 A0A1W2PQC6 194 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 H3BNC9 293 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 GABRDO14764 452 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 LILRB3O75022 631 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 FGF18O76093 207 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 NOL4O94818 638 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 CYP11A1P05108 521 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 TYMPP19971 482 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 FGFR3P22607 806 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 PPM1AP35813 382 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 MYL7Q01449 175 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 UBXN1Q04323 297 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
CD46-214ENST00000480003 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 WDR72Q3MJ13 1102 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 SV2CQ496J9 727 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 ZNF667Q5HYK9 610 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 SPOPLQ6IQ16 392 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 FUT10Q6P4F1 479 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 DEFB123Q8N688 67 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
CD46-214ENST00000480003 PRR14Q9BWN1 585 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms