RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 KCNE1P15382 129 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 RPL9P32969 192 aaKnown RBP18.96■□□□□ 0.63
HMGN1-212ENST00000479586 KRT2P35908 639 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 ZNF568Q3ZCX4 644 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 FSTL4Q6MZW2 842 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 HHIPQ96QV1 700 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 NACC1Q96RE7 527 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 PCDHB8Q9UN66 801 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
HMGN1-212ENST00000479586 CITO14578 2027 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 DCLK1O15075 740 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 CDKL5O76039 1030 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 EPHB3P54753 998 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 CREB5Q02930 508 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 RING1Q06587 406 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 DUSP4Q13115 394 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 PLD1Q13393 1074 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 GPR158Q5T848 1215 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 BPIFB1Q8TDL5 484 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 IFT74Q96LB3 600 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
HMGN1-212ENST00000479586 SCNM1Q9BWG6 230 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 ATXN3LQ9H3M9 355 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 PTPRHQ9HD43 1115 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 OBP2AQ9NY56 170 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 CNTN3Q9P232 1028 aa18.95■□□□□ 0.62
HMGN1-212ENST00000479586 TIMM13Q9Y5L4 95 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-212ENST00000479586 LNP1A1A4G5 178 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 K7ERI5 159 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 SOAT2O75908 522 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 TMEM196Q5HYL7 178 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 TTC9BQ8N6N2 239 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 ZCCHC14Q8WYQ9 949 aaKnown RBP18.94■□□□□ 0.62
HMGN1-212ENST00000479586 CHFRQ96EP1 664 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 SMG9Q9H0W8 520 aaKnown RBP18.94■□□□□ 0.62
HMGN1-212ENST00000479586 DAXXQ9UER7 740 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-212ENST00000479586 TUBGCP4Q9UGJ1 667 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 LHX6Q9UPM6 363 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 SLC27A5Q9Y2P5 690 aa18.94■□□□□ 0.62
HMGN1-212ENST00000479586 BCLAF3A2AJT9 711 aaKnown RBP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 ATG13O75143 517 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 RNF40O75150 1001 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 CAVIN2O95810 425 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 GABRR2P28476 465 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 MARCKSP29966 332 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 ALDH1A3P47895 512 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 CYP4F8P98187 520 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 YWHAHQ04917 246 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 GRSF1Q12849 480 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 ELF2Q15723 593 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 DAB2IPQ5VWQ8 1189 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 DNAJB7Q7Z6W7 309 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 ACAP3Q96P50 834 aa18.93■□□□□ 0.62
HMGN1-212ENST00000479586 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-212ENST00000479586 FREM2Q5SZK8 3169 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 SOBPA7XYQ1 873 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 ABLIM1O14639 778 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 OAZ2O95190 189 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 CTDNEP1O95476 244 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 EGFP01133 1207 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
HMGN1-212ENST00000479586 MCM2P49736 904 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 CAMKK1Q8N5S9 505 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
HMGN1-212ENST00000479586 HPS4Q9NQG7 708 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 GKN1Q9NS71 199 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-212ENST00000479586 PHLPP2Q6ZVD8 1323 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 SETXQ7Z333 2677 aaKnown RBP18.92■□□□□ 0.62
HMGN1-212ENST00000479586 GCN1Q92616 2671 aaKnown RBP18.92■□□□□ 0.62
HMGN1-212ENST00000479586 LAMA5O15230 3695 aa18.92■□□□□ 0.62
HMGN1-212ENST00000479586 OTOL1A6NHN0 477 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-212ENST00000479586 M0QZQ0 153 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 RHOBTB1O94844 696 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 MCF2P10911 925 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 ARHGAP15Q53QZ3 475 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 CENPPQ6IPU0 288 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 KIAA1211LQ6NV74 962 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 TAS1R3Q7RTX0 852 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 ATAD1Q8NBU5 361 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 KIFAP3Q92845 792 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
HMGN1-212ENST00000479586 TASP1Q9H6P5 420 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 FBRSL1Q9HCM7 1045 aaKnown RBP18.91■□□□□ 0.62
HMGN1-212ENST00000479586 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 NUP205Q92621 2012 aa18.91■□□□□ 0.62
HMGN1-212ENST00000479586 MTMR11A4FU01 709 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 CCDC169A6NNP5 214 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 TRDMT1O14717 391 aaKnown RBP18.9■□□□□ 0.62
HMGN1-212ENST00000479586 CEACAM1P13688 526 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 CSRP1P21291 193 aaKnown RBP18.9■□□□□ 0.62
HMGN1-212ENST00000479586 PROZP22891 400 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms