RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ATXN3LQ9H3M9 355 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
DDX56-210ENST00000479440 THG1LQ9NWX6 298 aaKnown RBP17.55■□□□□ 0.4
DDX56-210ENST00000479440 ARHGAP28Q9P2N2 729 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 TUBGCP4Q9UGJ1 667 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 RALYQ9UKM9 306 aaKnown RBP17.55■□□□□ 0.4
DDX56-210ENST00000479440 M0QZQ0 153 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 EXTL3O43909 919 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 OAZ2O95190 189 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 CCT6AP40227 531 aaKnown RBP17.54■□□□□ 0.4
DDX56-210ENST00000479440 FOSBP53539 338 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 DUSP4Q13115 394 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 GPR17Q13304 367 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 KARSQ15046 597 aaKnown RBP17.54■□□□□ 0.4
DDX56-210ENST00000479440 ITPRIPL2Q3MIP1 535 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 UNQ6494/PRO21346Q6UXR6 183 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 TMEM209Q96SK2 561 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 MKNK1Q9BUB5 465 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 KMT5AQ9NQR1 393 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 ANKFY1Q9P2R3 1169 aa17.54■□□□□ 0.4
DDX56-210ENST00000479440 RBM19Q9Y4C8 960 aaKnown RBP17.54■□□□□ 0.4
DDX56-210ENST00000479440 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 ABLIM1O14639 778 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 GABRR2P28476 465 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 WEE1P30291 646 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 GRSF1Q12849 480 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX56-210ENST00000479440 MYBPC2Q14324 1141 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 SAFBQ15424 915 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX56-210ENST00000479440 ELF2Q15723 593 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 GTF3C6Q969F1 213 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
DDX56-210ENST00000479440 EDEM2Q9BV94 578 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 STK24Q9Y6E0 443 aa17.53■□□□□ 0.4
DDX56-210ENST00000479440 MTMR11A4FU01 709 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 VNN2O95498 520 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 CDC25CP30307 473 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 LRPAP1P30533 357 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 PXNP49023 591 aaPredicted RBP17.52■□□□□ 0.4
DDX56-210ENST00000479440 NOVA1P51513 510 aaKnown RBP17.52■□□□□ 0.4
DDX56-210ENST00000479440 TNK2Q07912 1038 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 STRN3Q13033 797 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 VEPH1Q14D04 833 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 DSTYKQ6XUX3 929 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 GAREM2Q75VX8 874 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 TAS1R3Q7RTX0 852 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 CAMKK1Q8N5S9 505 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 NSUN7Q8NE18 718 aaKnown RBP17.52■□□□□ 0.4
DDX56-210ENST00000479440 CRISPLD1Q9H336 500 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 TASP1Q9H6P5 420 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
DDX56-210ENST00000479440 HSFX1Q9UBD0 423 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 ZMIZ1Q9ULJ6 1067 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
DDX56-210ENST00000479440 TIMM13Q9Y5L4 95 aaPredicted RBP17.52■□□□□ 0.4
DDX56-210ENST00000479440 CITO14578 2027 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
DDX56-210ENST00000479440 HIP1RO75146 1068 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 TOM1L1O75674 476 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 HOXC13P31276 330 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX56-210ENST00000479440 COL9A2Q14055 689 aaPredicted RBP17.51■□□□□ 0.39
DDX56-210ENST00000479440 ECM1Q16610 540 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 SLC10A6Q3KNW5 377 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 TMEM196Q5HYL7 178 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 DNAJB7Q7Z6W7 309 aaPredicted RBP17.51■□□□□ 0.39
DDX56-210ENST00000479440 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 SNX29Q8TEQ0 813 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 EXOC4Q96A65 974 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 KIF12Q96FN5 646 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 LRRC3BQ96PB8 259 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 SMOC1Q9H4F8 434 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 PLEKHA5Q9HAU0 1116 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 ZMYM5Q9UJ78 669 aa17.51■□□□□ 0.39
DDX56-210ENST00000479440 UBQLN1Q9UMX0 589 aaKnown RBP17.51■□□□□ 0.39
DDX56-210ENST00000479440 TMEM8BA6NDV4 472 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 C1QTNF9BB2RNN3 333 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 MEFVO15553 781 aaPredicted RBP17.5■□□□□ 0.39
DDX56-210ENST00000479440 RHOBTB1O94844 696 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 C1QTNF9P0C862 333 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 CXCL8P10145 99 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 TYMPP19971 482 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 CYP3A5P20815 502 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX56-210ENST00000479440 CYP4F8P98187 520 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 AMPD2Q01433 879 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
DDX56-210ENST00000479440 ZNF252P-AS1Q0IIN9 211 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 ZNF174Q15697 407 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 PLK5Q496M5 336 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 DAB2IPQ5VWQ8 1189 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 OVOS1Q6IE37 1185 aa17.5■□□□□ 0.39
DDX56-210ENST00000479440 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms