RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 B3GAT3O94766 335 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 RFX1P22670 979 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 CLCN1P35523 988 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 KRT9P35527 623 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 PNPLA4P41247 253 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 SV2CQ496J9 727 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 DRC7Q8IY82 874 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 FAM71AQ8IYT1 594 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 SLC39A11Q8N1S5 342 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 SUSD3Q96L08 255 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 RNPC3Q96LT9 517 aaKnown RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 YME1L1Q96TA2 773 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 RTP3Q9BQQ7 232 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 SYT11Q9BT88 431 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 GPR62Q9BZJ7 368 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 IMPG2Q9BZV3 1241 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 ELOVL4Q9GZR5 314 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 KCNF1Q9H3M0 494 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 CISHQ9NSE2 258 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 ABHD10Q9NUJ1 306 aa14.04□□□□□ -0.16
CHD3-210ENST00000479080 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 TIMM13Q9Y5L4 95 aaPredicted RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
CHD3-210ENST00000479080 RANBP2P49792 3224 aaKnown RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 AKR1B15C9JRZ8 316 aaPredicted RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 CILPO75339 1184 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 CD58P19256 250 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 HNRNPH3P31942 346 aaKnown RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 SOX5P35711 763 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 MFAP3P55082 362 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 INCA1Q0VD86 236 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 MYO1EQ12965 1108 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 ORC1Q13415 861 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 MEA1Q16626 185 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 KIAA0319Q5VV43 1072 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 WSCD1Q658N2 575 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 TAS1R1Q7RTX1 841 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 IRF2BP2Q7Z5L9 587 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 TOP6BLQ8N6T0 577 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 CLP1Q92989 425 aaKnown RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 FAXDC2Q96IV6 333 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 FAM193BQ96PV7 902 aaPredicted RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 RAD9AQ99638 391 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 LPIN3Q9BQK8 851 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 UBE2OQ9C0C9 1292 aaKnown RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 LUC7L2Q9Y383 392 aaKnown RBP14.03□□□□□ -0.16
CHD3-210ENST00000479080 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
CHD3-210ENST00000479080 LINC01553A4QN01 128 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 CYB561D2O14569 222 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 GABRDO14764 452 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 CYP26A1O43174 497 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 TACC1O75410 805 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 GFPT2O94808 682 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 CYP11A1P05108 521 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 PLEKP08567 350 aaPredicted RBP14.02□□□□□ -0.17
CHD3-210ENST00000479080 WARSP23381 471 aaKnown RBP14.02□□□□□ -0.17
CHD3-210ENST00000479080 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
CHD3-210ENST00000479080 TKTP29401 623 aaKnown RBP14.02□□□□□ -0.17
CHD3-210ENST00000479080 PBX2P40425 430 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 TNNC1P63316 161 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 CACNA2D4Q7Z3S7 1137 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 PPFIBP1Q86W92 1011 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 SLC4A11Q8NBS3 891 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 RBBP8NLQ8NC74 664 aaPredicted RBP14.02□□□□□ -0.17
CHD3-210ENST00000479080 IQCDQ96DY2 449 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 IGSF21Q96ID5 467 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 B3GALT6Q96L58 329 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 DPEP3Q9H4B8 488 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 CYP3A43Q9HB55 503 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 ARHGAP20Q9P2F6 1191 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 ADAM28Q9UKQ2 775 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 MYO6Q9UM54 1294 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 FAN1Q9Y2M0 1017 aa14.02□□□□□ -0.17
CHD3-210ENST00000479080 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
CHD3-210ENST00000479080 TLL1O43897 1013 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 CFHP08603 1231 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 SKILP12757 684 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 LAG3P18627 525 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 LMO2P25791 158 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 BMP8BP34820 402 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 PRKCIP41743 596 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 STAT1P42224 750 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 NDST1P52848 882 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 RAD23BP54727 409 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 CCZ1BP86790 482 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 CCZ1P86791 482 aaPredicted RBP14.01□□□□□ -0.17
CHD3-210ENST00000479080 FUT10Q6P4F1 479 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 ENOSF1Q7L5Y1 443 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 ADGRF2Q8IZF7 708 aa14.01□□□□□ -0.17
CHD3-210ENST00000479080 CCDC150Q8NCX0 1101 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms