RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PCDHGA5Q9Y5G8 931 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 TIMM13Q9Y5L4 95 aaPredicted RBP18.74■□□□□ 0.59
VIM-204ENST00000478746 M0QZQ0 153 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 FGF19O95750 216 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 CENPBP07199 599 aaPredicted RBP18.73■□□□□ 0.59
VIM-204ENST00000478746 OR52Z1P0C646 297 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 HARSP12081 509 aaKnown RBP18.73■□□□□ 0.59
VIM-204ENST00000478746 PROZP22891 400 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 TNK2Q07912 1038 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 GPR17Q13304 367 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 PTPAQ15257 358 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 ANKRD1Q15327 319 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 ZNF174Q15697 407 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 ARHGAP15Q53QZ3 475 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 HAUS3Q68CZ6 603 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 GAREM2Q75VX8 874 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 TAS1R3Q7RTX0 852 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 DNAJB7Q7Z6W7 309 aaPredicted RBP18.73■□□□□ 0.59
VIM-204ENST00000478746 USP37Q86T82 979 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 BPIFB1Q8TDL5 484 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 TMEM209Q96SK2 561 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 MKNK1Q9BUB5 465 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 CRISPLD1Q9H336 500 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 SMOC1Q9H4F8 434 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 KMT5AQ9NQR1 393 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 SLC8A2Q9UPR5 921 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 KIAA1024Q9UPX6 916 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 SLC27A5Q9Y2P5 690 aa18.73■□□□□ 0.59
VIM-204ENST00000478746 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
VIM-204ENST00000478746 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 MEFVO15553 781 aaPredicted RBP18.72■□□□□ 0.59
VIM-204ENST00000478746 ATG13O75143 517 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 DMP1Q13316 513 aaPredicted RBP18.72■□□□□ 0.59
VIM-204ENST00000478746 ITPRIPL2Q3MIP1 535 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 RNF43Q68DV7 783 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 CENPPQ6IPU0 288 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 PSAPL1Q6NUJ1 521 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 PKN3Q6P5Z2 889 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 ZBTB45Q96K62 511 aaPredicted RBP18.72■□□□□ 0.59
VIM-204ENST00000478746 ZC3H10Q96K80 434 aaKnown RBP18.72■□□□□ 0.59
VIM-204ENST00000478746 VPS45Q9NRW7 570 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 THG1LQ9NWX6 298 aaKnown RBP18.72■□□□□ 0.59
VIM-204ENST00000478746 ARHGAP28Q9P2N2 729 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 TUBGCP4Q9UGJ1 667 aa18.72■□□□□ 0.59
VIM-204ENST00000478746 LAMA1P25391 3075 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 ATG2BQ96BY7 2078 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 ABLIM1O14639 778 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 AKAP3O75969 853 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 GABRR2P28476 465 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 MPLP40238 635 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 CACNB1Q02641 598 aaPredicted RBP18.71■□□□□ 0.59
VIM-204ENST00000478746 COL9A2Q14055 689 aaPredicted RBP18.71■□□□□ 0.59
VIM-204ENST00000478746 SEZ6Q53EL9 994 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 ATAD1Q8NBU5 361 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 PSMG2Q969U7 264 aa18.71■□□□□ 0.59
VIM-204ENST00000478746 HIP1RO75146 1068 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 WEE1P30291 646 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 GRSF1Q12849 480 aaKnown RBP eCLIP18.7■□□□□ 0.58
VIM-204ENST00000478746 SAFBQ15424 915 aaKnown RBP eCLIP18.7■□□□□ 0.58
VIM-204ENST00000478746 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 ITIH5Q86UX2 942 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
VIM-204ENST00000478746 TASP1Q9H6P5 420 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 GKN1Q9NS71 199 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
VIM-204ENST00000478746 KIF26AQ9ULI4 1882 aaPredicted RBP18.7■□□□□ 0.58
VIM-204ENST00000478746 ZMIZ1Q9ULJ6 1067 aa18.7■□□□□ 0.58
VIM-204ENST00000478746 C1QTNF9BB2RNN3 333 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 SLC16A4O15374 487 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 SOAT2O75908 522 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 PRAMEF12O95522 483 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 C1QTNF9P0C862 333 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 LRPAP1P30533 357 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 MCM2P49736 904 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 SPAG1Q07617 926 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 ORC2Q13416 577 aaPredicted RBP18.69■□□□□ 0.58
VIM-204ENST00000478746 MYBPC2Q14324 1141 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 ME3Q16798 604 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 TMEM196Q5HYL7 178 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 UNQ6494/PRO21346Q6UXR6 183 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 DAW1Q8N136 415 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 TMEM130Q8N3G9 435 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 CAMKK1Q8N5S9 505 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 DRC1Q96MC2 740 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 PLEKHA5Q9HAU0 1116 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 ANKFY1Q9P2R3 1169 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 LRWD1Q9UFC0 647 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 DNM3Q9UQ16 869 aa18.69■□□□□ 0.58
VIM-204ENST00000478746 MTMR11A4FU01 709 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 JAK2O60674 1132 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 TOM1L1O75674 476 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 NOVA1P51513 510 aaKnown RBP18.68■□□□□ 0.58
VIM-204ENST00000478746 STRN3Q13033 797 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.58
VIM-204ENST00000478746 PLK5Q496M5 336 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 OVOS1Q6IE37 1185 aa18.68■□□□□ 0.58
VIM-204ENST00000478746 FSTL4Q6MZW2 842 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms