RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CLIC2O15247 247 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 LDHAP00338 332 aaKnown RBP20.28■□□□□ 0.84
SREBF1-212ENST00000478616 FSHRP23945 695 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 POLR2BP30876 1174 aaKnown RBP20.28■□□□□ 0.84
SREBF1-212ENST00000478616 GBP2P32456 591 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-212ENST00000478616 ADCY1Q08828 1119 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 HTR4Q13639 388 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 OVOS1Q6IE37 1185 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 DSTYKQ6XUX3 929 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 RTL10Q7L3V2 364 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 LRRTM3Q86VH5 581 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 LRRC3Q9BY71 257 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 DNAJC25Q9H1X3 360 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 CYP4F11Q9HBI6 524 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 OBSL1O75147 1896 aa20.28■□□□□ 0.84
SREBF1-212ENST00000478616 UBE4BO95155 1302 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 PTPRDP23468 1912 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 ITGB3P05106 788 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 TAF6P49848 677 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 CDR1P51861 262 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 VCPP55072 806 aaKnown RBP20.27■□□□□ 0.84
SREBF1-212ENST00000478616 TFAMQ00059 246 aaKnown RBP20.27■□□□□ 0.84
SREBF1-212ENST00000478616 GPR17Q13304 367 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 MTMR3Q13615 1198 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 WSCD1Q658N2 575 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 NPAS3Q8IXF0 933 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 HS6ST3Q8IZP7 471 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 FGF13Q92913 245 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 FGF14Q92915 247 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 TCEAL4Q96EI5 215 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 PGLYRP2Q96PD5 576 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 MTMR12Q9C0I1 747 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 KCTD10Q9H3F6 313 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 INTS13Q9NVM9 706 aa20.27■□□□□ 0.84
SREBF1-212ENST00000478616 COL4A2P08572 1712 aa20.27■□□□□ 0.83
SREBF1-212ENST00000478616 MTMR11A4FU01 709 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 CYB561D2O14569 222 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 HCRTO43612 131 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 RHOP08100 348 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 DPYDQ12882 1025 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 CCDC142Q17RM4 750 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 IER5LQ5T953 404 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 CENPPQ6IPU0 288 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 PARM1Q6UWI2 310 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 LIMS2Q7Z4I7 341 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 OSTM1Q86WC4 334 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 C12orf56Q8IXR9 622 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 UBALD2Q8IYN6 164 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 SLC44A3Q8N4M1 653 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 FSIP1Q8NA03 581 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 ATAD1Q8NBU5 361 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 ZNF516Q92618 1163 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 PYM1Q9BRP8 204 aaKnown RBP20.26■□□□□ 0.83
SREBF1-212ENST00000478616 AVENQ9NQS1 362 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-212ENST00000478616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.83
SREBF1-212ENST00000478616 CDH7Q9ULB5 785 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 DUSP12Q9UNI6 340 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 AGAP1Q9UPQ3 857 aa20.26■□□□□ 0.83
SREBF1-212ENST00000478616 GREB1Q4ZG55 1949 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 OR6C75A6NL08 312 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 KPNA7A9QM74 516 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 KIAA0391O15091 583 aaKnown RBP20.25■□□□□ 0.83
SREBF1-212ENST00000478616 ODC1P11926 461 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 CPB1P15086 417 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 CEBPBP17676 345 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 SYKP43405 635 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 DUSP4Q13115 394 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 TDGQ13569 410 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 MYBPC2Q14324 1141 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 PABPC1LQ4VXU2 614 aaKnown RBP20.25■□□□□ 0.83
SREBF1-212ENST00000478616 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 CEP57L1Q8IYX8 460 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 ING5Q8WYH8 240 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 PBXIP1Q96AQ6 731 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 SCAND2PQ9GZW5 306 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-212ENST00000478616 ZCWPW1Q9H0M4 648 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 TMLHEQ9NVH6 421 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 DMAC2Q9NW81 257 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 IGSF9Q9P2J2 1179 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 L1RE1Q9UN81 338 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 YIPF1Q9Y548 306 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 NME7Q9Y5B8 376 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 NUMBLQ9Y6R0 609 aa20.25■□□□□ 0.83
SREBF1-212ENST00000478616 ZNF233A6NK53 670 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 XYLBO75191 536 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 SOAT2O75908 522 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 NPR3P17342 541 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 CYP2J2P51589 502 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 EPHA5P54756 1037 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 CYP24A1Q07973 514 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 TWF1Q12792 350 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 SNRNP35Q16560 246 aaKnown RBP20.24■□□□□ 0.83
SREBF1-212ENST00000478616 KNOP1Q1ED39 458 aaKnown RBP20.24■□□□□ 0.83
SREBF1-212ENST00000478616 STXBP4Q6ZWJ1 553 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 TMC8Q8IU68 726 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 FBXL6Q8N531 539 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 RDH13Q8NBN7 331 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 NOC3LQ8WTT2 800 aaKnown RBP20.24■□□□□ 0.83
SREBF1-212ENST00000478616 PKMYT1Q99640 499 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms