RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GPD1P21695 349 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 LONRF1Q17RB8 773 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 SCG3Q8WXD2 468 aaKnown RBP14.94□□□□□ -0.02
NPHP4-208ENST00000478423 ARHGEF26Q96DR7 871 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 ISCUQ9H1K1 167 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 SYNPO2Q9UMS6 1093 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 FRMPD4Q14CM0 1322 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 CYP3A4P08684 503 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 INSRRP14616 1297 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 OAZ1P54368 228 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 MYL6P60660 151 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 OCRLQ01968 901 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 VEPH1Q14D04 833 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 GOLGA7BQ2TAP0 167 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 PAPD7Q5XG87 772 aaKnown RBP14.94□□□□□ -0.02
NPHP4-208ENST00000478423 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
NPHP4-208ENST00000478423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■■■■ 28.1
NPHP4-208ENST00000478423 CPA4Q9UI42 421 aa14.94□□□□□ -0.02
NPHP4-208ENST00000478423 PPARGP37231 505 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 COPS2P61201 443 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 KDELC2Q7Z4H8 507 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 ATXN7L3BQ96GX2 97 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 ZIM3Q96PE6 472 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 CGRRF1Q99675 332 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 ASCC2Q9H1I8 757 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 KCNMB3Q9NPA1 279 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 TPX2Q9ULW0 747 aaKnown RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 MYO1CO00159 1063 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 WNT7AO00755 349 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 B3GAT3O94766 335 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 FGRP09769 529 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 SLC12A3P55017 1021 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 NUDCD3Q8IVD9 361 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 SENP1Q9P0U3 644 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 BAG5Q9UL15 447 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 PRG3Q9Y2Y8 225 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 UPP2O95045 317 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 COILP38432 576 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-208ENST00000478423 CASP2P42575 452 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 ACADSBP45954 432 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 LAMTOR4Q0VGL1 99 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 RAPGEF5Q92565 580 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 LRGUKQ96M69 825 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 TRABDQ9H4I3 376 aa14.93□□□□□ -0.02
NPHP4-208ENST00000478423 AGTP01019 485 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 KITP10721 976 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 PRLRP16471 622 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 TAC1P20366 129 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 TATDN2Q93075 761 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 LRRC37BQ96QE4 947 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 AIPL1Q9NZN9 384 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ZC3H7BQ9UGR2 993 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 KPNA7A9QM74 516 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 CASQ2O14958 399 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 RGS2P41220 211 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 MAPK7Q13164 816 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 TBX2Q13207 712 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ART3Q13508 389 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 RNF219Q5W0B1 726 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ALG13Q9NP73 1137 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ATRNO75882 1429 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 CCDC195A0A1B0GUA6 201 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 CFAP69A5D8W1 941 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 MAP2K2P36507 400 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ALDH5A1P51649 535 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ITGA8P53708 1063 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ZNF235Q14590 738 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 DCAF4L1Q3SXM0 396 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 BOLA3Q53S33 107 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 VSIG10LQ86VR7 867 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 SLC7A14Q8TBB6 771 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 HNRNPLLQ8WVV9 542 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ATG4AQ8WYN0 398 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ANKRD26Q9UPS8 1709 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 VGLL3A8MV65 326 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 MAPTP10636 758 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 MDH1P40925 334 aaKnown RBP14.92□□□□□ -0.02
NPHP4-208ENST00000478423 PNPLA4P41247 253 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 OR1G1P47890 313 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 EFHC1Q5JVL4 640 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 NDUFAF2Q8N183 169 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 SPIRE2Q8WWL2 714 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 ABCF3Q9NUQ8 709 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 CHMP2BQ9UQN3 213 aa14.92□□□□□ -0.02
NPHP4-208ENST00000478423 C17orf102A2RUQ5 167 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 KBTBD13C9JR72 458 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 CXCL8P10145 99 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 CASP5P51878 434 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 SLC29A2Q14542 456 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 IL17AQ16552 155 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms