RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 AP3M2P53677 418 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 MYL6P60660 151 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 KRT31Q15323 416 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 MIIPQ5JXC2 388 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 KRT39Q6A163 491 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TAS1R1Q7RTX1 841 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TAB2Q9NYJ8 693 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 RWDD3Q9Y3V2 267 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 GRM6O15303 877 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 CSPG5O95196 566 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 EFEMP2O95967 443 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 RB1P06400 928 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
CBWD3-206ENST00000478048 DNAJB1P25685 340 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 LILRA4P59901 499 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 RBP5P82980 135 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 NCOA4Q13772 614 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 MAN2A1Q16706 1144 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 FUT10Q6P4F1 479 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 APTXQ7Z2E3 356 aaKnown RBP12.33□□□□□ -0.44
CBWD3-206ENST00000478048 SPPL3Q8TCT6 385 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 SEMA4DQ92854 862 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 B3GALT6Q96L58 329 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 SAMD11Q96NU1 681 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 PLVAPQ9BX97 442 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 NUB1Q9Y5A7 615 aa12.33□□□□□ -0.44
CBWD3-206ENST00000478048 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.44
CBWD3-206ENST00000478048 H3BNC9 293 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 STX10O60499 249 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 AFPP02771 609 aaKnown RBP12.32□□□□□ -0.44
CBWD3-206ENST00000478048 CFHP08603 1231 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
CBWD3-206ENST00000478048 PPM1AP35813 382 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 TAF6P49848 677 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 PLCB3Q01970 1234 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 GPM6BQ13491 265 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 TRPC3Q13507 836 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-206ENST00000478048 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 VPS16Q9H269 839 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
CBWD3-206ENST00000478048 TRANK1O15050 2925 aa12.32□□□□□ -0.44
CBWD3-206ENST00000478048 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 AARSP49588 968 aaKnown RBP eCLIP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 MYL7Q01449 175 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 KRT17Q04695 432 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 CAMK1Q14012 370 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 LRRC52Q8N7C0 313 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 FBXL13Q8NEE6 735 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 SENP8Q96LD8 212 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 C11orf84Q9BUA3 381 aaPredicted RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 NDST4Q9H3R1 872 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 RAB20Q9NX57 234 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 COQ4Q9Y3A0 265 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 ATG2AQ2TAZ0 1938 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 PMM2O15305 246 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 LPXNO60711 386 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 COPB1P53618 953 aaKnown RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 SV2CQ496J9 727 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 DDX53Q86TM3 631 aaKnown RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 LMO3Q8TAP4 145 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 SUSD3Q96L08 255 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 TIMM13Q9Y5L4 95 aaPredicted RBP12.31□□□□□ -0.44
CBWD3-206ENST00000478048 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
CBWD3-206ENST00000478048 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-206ENST00000478048 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
CBWD3-206ENST00000478048 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
CBWD3-206ENST00000478048 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
CBWD3-206ENST00000478048 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
CBWD3-206ENST00000478048 M0QZQ0 153 aa12.3□□□□□ -0.44
CBWD3-206ENST00000478048 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms