RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PTGISQ16647 500 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 HSDL1Q3SXM5 330 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 TNFAIP8L3Q5GJ75 292 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 FOXR1Q6PIV2 292 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 BCAS4Q8TDM0 211 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 MANSC4A6NHS7 340 aaPredicted RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 THAP12O43422 761 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 TNFSF9P41273 254 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 PLTPP55058 493 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 DENND2CQ68D51 928 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 DRICH1Q6PGQ1 229 aaPredicted RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 LINC01465Q8N7H1 131 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
PTPRF-212ENST00000477970 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
PTPRF-212ENST00000477970 COPS2P61201 443 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 ADCY2Q08462 1091 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 PDCLQ13371 301 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 KYAT1Q16773 422 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
PTPRF-212ENST00000477970 RNF149Q8NC42 400 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 BBOF1Q8ND07 529 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 ROPN1BQ9BZX4 212 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TRIM31Q9BZY9 425 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 ROPN1Q9HAT0 212 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-212ENST00000477970 MGAMO43451 1857 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TMEM191CA6NGB0 347 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 PEX10O60683 326 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 ATL2Q8NHH9 583 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-212ENST00000477970 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 SPATA33Q96N06 139 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 XYLT2Q9H1B5 865 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 LHX5Q9H2C1 402 aa12.97□□□□□ -0.33
PTPRF-212ENST00000477970 TP73O15350 636 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CST3P01034 146 aaPredicted RBP12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CALCAP01258 141 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 MBTD1Q05BQ5 628 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 ATF7IP2Q5U623 682 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 MFSD5Q6N075 450 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 B4GALNT4Q76KP1 1039 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 SNF8Q96H20 258 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 FAM84AQ96KN4 292 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 FOXP3Q9BZS1 431 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.33
PTPRF-212ENST00000477970 GAS8O95995 478 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CFHP08603 1231 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 IVDP26440 423 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 ASPAP45381 313 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CTCFP49711 727 aaPredicted RBP12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CALCOCO2Q13137 446 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 KRT71Q3SY84 523 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 C6orf118Q5T5N4 469 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
PTPRF-212ENST00000477970 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 TMEM35BQ8NCS4 154 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 RBM41Q96IZ5 413 aaKnown RBP12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CLMNQ96JQ2 1002 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 BCO2Q9BYV7 579 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 CISHQ9NSE2 258 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.33
PTPRF-212ENST00000477970 EBAG9O00559 213 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.34
PTPRF-212ENST00000477970 RIPK2O43353 540 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 C22orf31O95567 290 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 AGTP01019 485 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 TNNC2P02585 160 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 ATP1A2P50993 1020 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 TNFAIP2Q03169 654 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 KRT17Q04695 432 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 IFFO1Q0D2I5 559 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 Q3C1V9 767 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 CEP128Q6ZU80 1094 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 ANKRD36BP1Q96IX9 119 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.34
PTPRF-212ENST00000477970 ERAP1Q9NZ08 941 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 STRIP2Q9ULQ0 834 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.34
PTPRF-212ENST00000477970 CDR1P51861 262 aa12.95□□□□□ -0.34
PTPRF-212ENST00000477970 CORO7P57737 925 aa12.95□□□□□ -0.34
PTPRF-212ENST00000477970 MYL6P60660 151 aa12.95□□□□□ -0.34
PTPRF-212ENST00000477970 LMNB2Q03252 620 aa12.95□□□□□ -0.34
PTPRF-212ENST00000477970 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms