RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 MINDY3Q9H8M7 445 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 LOC285556D6RIA3 1793 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 A0A087WUV0 522 aaPredicted RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 FOXO6A8MYZ6 492 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 RASGRF2O14827 1237 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 CSDE1O75534 798 aaKnown RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 HOXC6P09630 235 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 ADCY8P40145 1251 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 PTK6Q13882 451 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 LONRF1Q17RB8 773 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 TNFAIP8L3Q5GJ75 292 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 ERMARDQ5T6L9 678 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 EEF1DP3Q658K8 133 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 SCARA5Q6ZMJ2 495 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
MINDY3-206ENST00000477891 SNF8Q96H20 258 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 NLRP4Q96MN2 994 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 TMEM109Q9BVC6 243 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 XYLT2Q9H1B5 865 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
MINDY3-206ENST00000477891 SIP14410 1827 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 MEFVO15553 781 aaPredicted RBP11.16□□□□□ -0.62
MINDY3-206ENST00000477891 LGR5O75473 907 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 CLCN3P51790 818 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 IFT88Q13099 833 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 CCNG2Q16589 344 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 KYNUQ16719 465 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 KAZNQ674X7 775 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 GPAT2Q6NUI2 795 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 CCDC62Q6P9F0 684 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 TADA2BQ86TJ2 420 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 EXD1Q8NHP7 514 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 MAIP1Q8WWC4 291 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
MINDY3-206ENST00000477891 SCLT1Q96NL6 688 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 MCEEQ96PE7 176 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 XPO6Q96QU8 1125 aaKnown RBP11.16□□□□□ -0.62
MINDY3-206ENST00000477891 TSPYL1Q9H0U9 437 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 RNPEPQ9H4A4 650 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
MINDY3-206ENST00000477891 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 INO80B-WBP1J3KQ70 363 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 GAS8O95995 478 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 PROZP22891 400 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ASPAP45381 313 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 NFX1Q12986 1120 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 GRM1Q13255 1194 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 CYP4A22Q5TCH4 519 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TRMT10CQ7L0Y3 403 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 PLPPR4Q7Z2D5 763 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 EXOC3L1Q86VI1 746 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 INO80BQ9C086 356 aaPredicted RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 NIF3L1Q9GZT8 377 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 FZD8Q9H461 694 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 CNOT10Q9H9A5 744 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TJP2Q9UDY2 1190 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 IP6K2Q9UHH9 426 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ACKR2O00590 384 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TTC4O95801 387 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 AGTP01019 485 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 CREB1P16220 341 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 AP3M2P53677 418 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 CDH8P55286 799 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TRPC3Q13507 836 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 MOGSQ13724 837 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ATF7IP2Q5U623 682 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 WDR78Q5VTH9 848 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 EFCAB12Q6NXP0 572 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 MFSD7Q6UXD7 560 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 SYDE1Q6ZW31 735 aaPredicted RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ERO1BQ86YB8 467 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ZBTB8OSQ8IWT0 167 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ATXN2LQ8WWM7 1075 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TCP11Q8WWU5 503 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 PPM1EQ8WY54 764 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 TRAIPQ9BWF2 469 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 FAM129AQ9BZQ8 928 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ADARB2Q9NS39 739 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 CTNNAL1Q9UBT7 734 aa11.15□□□□□ -0.62
MINDY3-206ENST00000477891 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
MINDY3-206ENST00000477891 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms