RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GPC5P78333 572 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.34
PRPF39-203ENST00000477626 MAMLD1Q13495 774 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 LPIN1Q14693 890 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.34
PRPF39-203ENST00000477626 HNRNPLLQ8WVV9 542 aaKnown RBP12.96□□□□□ -0.34
PRPF39-203ENST00000477626 ACAP3Q96P50 834 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 PKMYT1Q99640 499 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.34
PRPF39-203ENST00000477626 TRIM7Q9C029 511 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 CHST12Q9NRB3 414 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.34
PRPF39-203ENST00000477626 HYOU1Q9Y4L1 999 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 HES2Q9Y543 173 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.34
PRPF39-203ENST00000477626 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF623O75123 536 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 FTCDO95954 541 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 ITGB3P05106 788 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 AFF1P51825 1210 aaKnown RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TCTN1Q2MV58 587 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 NIPA2Q8N8Q9 360 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 UBE2Q2Q8WVN8 375 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.345e-10■■■□□ 16.6
PRPF39-203ENST00000477626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 SMARCAL1Q9NZC9 954 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TARSL2A2RTX5 802 aaKnown RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 RECQL4O94761 1208 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 RARBP10826 455 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 PDE6CP51160 858 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 ACLYP53396 1101 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 CHMP4BP1P59074 171 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TRIM72Q6ZMU5 477 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 RTN4RL1Q86UN2 441 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 GABRDO14764 452 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TP73O15350 636 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 C6orf222P0C671 652 aaPredicted RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 FGFR1P11362 822 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 RAP1GAPP47736 663 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 OGDHQ02218 1023 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TAZQ16635 292 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 UVRAGQ9P2Y5 699 aa12.95□□□□□ -0.34
PRPF39-203ENST00000477626 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF39-203ENST00000477626 MYBL1P10243 752 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 GPD2P43304 727 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 MARCKSL1P49006 195 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 OSTNP61366 133 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 FAM189BP81408 668 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 GPR161Q8N6U8 529 aaKnown RBP12.94□□□□□ -0.34
PRPF39-203ENST00000477626 SPATA4Q8NEY3 305 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 HERPUD2Q9BSE4 406 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 OBSL1O75147 1896 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 ATG2AQ2TAZ0 1938 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 MOXD2PA6NHM9 499 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 C3orf70A6NLC5 250 aaPredicted RBP12.94□□□□□ -0.34
PRPF39-203ENST00000477626 CAPN15O75808 1086 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 MAN1A1P33908 653 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 KIAA0319Q5VV43 1072 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 AGMOQ6ZNB7 445 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 USP38Q8NB14 1042 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 ANKRD36BP1Q96IX9 119 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 FAM49AQ9H0Q0 323 aaPredicted RBP12.94□□□□□ -0.34
PRPF39-203ENST00000477626 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
PRPF39-203ENST00000477626 O00370 1275 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 RPLP2P05387 115 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 GNAT1P11488 350 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 GNA15P30679 374 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 POLR2BP30876 1174 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 CYP1B1Q16678 543 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 RUBCNQ92622 972 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 KRT35Q92764 455 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF518BQ9C0D4 1074 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 MIOSQ9NXC5 875 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.93□□□□□ -0.343e-10■■■■□ 19.3
PRPF39-203ENST00000477626 V9GYY5 206 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 FAM163BP0C2L3 166 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 HARSP12081 509 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 CDH8P55286 799 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 BPIFB4P59827 614 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 WDR44Q5JSH3 913 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms