RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CERS4Q9HA82 394 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 TMEM8AQ9HCN3 771 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 SPG21Q9NZD8 308 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.12■□□□□ 0.49
EPHB4-204ENST00000477446 PLXNA4Q9HCM2 1894 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 CARNS1A5YM72 827 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 C5orf67F2Z3F1 127 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 KIF5CO60282 957 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 CST3P01034 146 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-204ENST00000477446 POLR2BP30876 1174 aaKnown RBP18.11■□□□□ 0.49
EPHB4-204ENST00000477446 GNG11P61952 73 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 BIRC3Q13489 604 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 CCDC170Q8IYT3 715 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 KLHL23Q8NBE8 558 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 ANKRD7Q92527 254 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 IGSF21Q96ID5 467 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 PCMTD1Q96MG8 357 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-204ENST00000477446 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 AGAP1Q9UPQ3 857 aa18.11■□□□□ 0.49
EPHB4-204ENST00000477446 EPN1Q9Y6I3 576 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-204ENST00000477446 TMEM189-UBE2V1I3L0A0 370 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 PHACTR2O75167 634 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 FGF18O76093 207 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 VNN1O95497 513 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 PPM1AP35813 382 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 KRT83P78385 493 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 RBP5P82980 135 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 CBWD6Q4V339 395 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 CBWD3Q5JTY5 395 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 CBWD5Q5RIA9 395 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 KRT39Q6A163 491 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 ZNF662Q6ZS27 426 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 LRCH3Q96II8 777 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 PDCL3Q9H2J4 239 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 ADAM28Q9UKQ2 775 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 CHD7Q9P2D1 2997 aa18.1■□□□□ 0.49
EPHB4-204ENST00000477446 RNF225M0QZC1 329 aaPredicted RBP18.09■□□□□ 0.49
EPHB4-204ENST00000477446 TADA2AO75478 443 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 RB1P06400 928 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 CYLC1P35663 651 aaPredicted RBP18.09■□□□□ 0.49
EPHB4-204ENST00000477446 FMO5P49326 533 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 MXI1P50539 228 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 MTF1Q14872 753 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 HABP4Q5JVS0 413 aaKnown RBP18.09■□□□□ 0.49
EPHB4-204ENST00000477446 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
EPHB4-204ENST00000477446 ZNF576Q9H609 170 aa18.09■□□□□ 0.49
EPHB4-204ENST00000477446 SPTLC1O15269 473 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 AFPP02771 609 aaKnown RBP18.08■□□□□ 0.49
EPHB4-204ENST00000477446 HNRNPH3P31942 346 aaKnown RBP18.08■□□□□ 0.49
EPHB4-204ENST00000477446 LILRA4P59901 499 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 MYL6P60660 151 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 PLCB3Q01970 1234 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 TRPC3Q13507 836 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 NCOA4Q13772 614 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 LRRC52Q8N7C0 313 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 FBXO22Q8NEZ5 403 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 TAS1R2Q8TE23 839 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 DESI2Q9BSY9 194 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 ALG13Q9NP73 1137 aaKnown RBP18.08■□□□□ 0.49
EPHB4-204ENST00000477446 NUB1Q9Y5A7 615 aa18.08■□□□□ 0.49
EPHB4-204ENST00000477446 NDUFA10O95299 355 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 EFEMP2O95967 443 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 HLA-DRAP01903 254 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 BRCC3P46736 316 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 TAF6P49848 677 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 KRT17Q04695 432 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 ARHGAP29Q52LW3 1261 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 HPDLQ96IR7 371 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 ZNF560Q96MR9 790 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 C11orf84Q9BUA3 381 aaPredicted RBP18.08■□□□□ 0.48
EPHB4-204ENST00000477446 VN1R3Q9BXE9 311 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 GPR62Q9BZJ7 368 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 SIK3Q9Y2K2 1263 aa18.08■□□□□ 0.48
EPHB4-204ENST00000477446 EPOPA6NHQ4 379 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 H3BNC9 293 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 I3L4J1 428 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 LRRN2O75325 713 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 IPO7O95373 1038 aaKnown RBP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 PNPLA4P41247 253 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 PIK3CAP42336 1068 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 AARSP49588 968 aaKnown RBP eCLIP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 MYL7Q01449 175 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 TIGD5Q53EQ6 642 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 DDX53Q86TM3 631 aaKnown RBP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 FBXL13Q8NEE6 735 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 SEMA4DQ92854 862 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 XYLT2Q9H1B5 865 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 TTYH1Q9H313 450 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-204ENST00000477446 HAUS4Q9H6D7 363 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 COQ4Q9Y3A0 265 aa18.07■□□□□ 0.48
EPHB4-204ENST00000477446 SF3B1O75533 1304 aaKnown RBP eCLIP18.06■□□□□ 0.484e-7■■■■■ 40.1
EPHB4-204ENST00000477446 TMEM265A0A087WTH1 108 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 KPNA7A9QM74 516 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 PMM2O15305 246 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms