RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 CD58P19256 250 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 KCNJ1P48048 391 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 EIF3HO15372 352 aaKnown RBP eCLIP12.21□□□□□ -0.45
NUP188-205ENST00000477069 TLR3O15455 904 aaKnown RBP12.21□□□□□ -0.45
NUP188-205ENST00000477069 GJB6O95452 261 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 TNNC2P02585 160 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 NFICP08651 508 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 NUDT17P0C025 328 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 MCF2P10911 925 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 CETPP11597 493 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 ADCYAP1R1P41586 468 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 PHKA2P46019 1235 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 PLTPP55058 493 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 OSTNP61366 133 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 TRPC3Q13507 836 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 ANKS1BQ7Z6G8 1248 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 RHOT1Q8IXI2 618 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 C1orf127Q8N9H9 656 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 BRI3BPQ8WY22 251 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 ANKRD36BP1Q96IX9 119 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 FAM129AQ9BZQ8 928 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
NUP188-205ENST00000477069 PASKQ96RG2 1323 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 A0A087WZ62 844 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.45
NUP188-205ENST00000477069 IQCA1LA6NCM1 817 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 MAGEB2O15479 319 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 WEE2P0C1S8 567 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 NR1D1P20393 614 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.45
NUP188-205ENST00000477069 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.45
NUP188-205ENST00000477069 IGBP1P78318 339 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 SGO2Q562F6 1265 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 CCDC105Q8IYK2 499 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
NUP188-205ENST00000477069 DCLK3Q9C098 648 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 NEU2Q9Y3R4 380 aa12.21□□□□□ -0.45
NUP188-205ENST00000477069 STRNO43815 780 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 ECEL1O95672 775 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 CALB1P05937 261 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 IVLP07476 585 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 MYZAPP0CAP1 466 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 ZNF286BP0CG31 522 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 GTF2A2P52657 109 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 GRB14Q14449 540 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 AGBL2Q5U5Z8 902 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 PNMA8AQ86V59 439 aaPredicted RBP12.21□□□□□ -0.46
NUP188-205ENST00000477069 TMEM130Q8N3G9 435 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 C1orf54Q8WWF1 131 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 PABPC3Q9H361 631 aaKnown RBP12.21□□□□□ -0.46
NUP188-205ENST00000477069 RPF1Q9H9Y2 349 aaKnown RBP12.21□□□□□ -0.46
NUP188-205ENST00000477069 IP6K2Q9UHH9 426 aa12.21□□□□□ -0.46
NUP188-205ENST00000477069 PDCD11Q14690 1871 aaKnown RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 CITO14578 2027 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 LACTBL1A8MY62 500 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 IVDP26440 423 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 PMS2P54278 862 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 GNGT1P63211 74 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 OGDHQ02218 1023 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 RHBDF2Q6PJF5 856 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 EXD1Q8NHP7 514 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 VRTNQ9H8Y1 702 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 R3HDM2Q9Y2K5 976 aaKnown RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 PTPN22Q9Y2R2 807 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 A6NNZ2 444 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 RALAP11233 206 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 KRT17Q04695 432 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 PTK6Q13882 451 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 CCL15Q16663 113 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 TUBB8Q3ZCM7 444 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 ZNF394Q53GI3 561 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 DNAJC21Q5F1R6 531 aaKnown RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 JADE1Q6IE81 842 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 RUFY4Q6ZNE9 571 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 TMEM35BQ8NCS4 154 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms