RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SYCP3Q8IZU3 236 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 ELMOD1Q8N336 334 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 KXD1Q9BQD3 176 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 FAM213AQ9BRX8 229 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 PLA2G2FQ9BZM2 168 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 CRISPLD1Q9H336 500 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 TBC1D17Q9HA65 648 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 ARHGEF3Q9NR81 526 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 FAM86C1Q9NVL1 165 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 MTMR11A4FU01 709 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 PROB1E7EW31 1015 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
SEC13-214ENST00000476597 CYB561D2O14569 222 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 F13A1P00488 732 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 TAF6P49848 677 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 WNT7BP56706 349 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 AMPD3Q01432 767 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
SEC13-214ENST00000476597 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
SEC13-214ENST00000476597 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 CNNM4Q6P4Q7 775 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 IQUBQ8NA54 791 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 DTWD2Q8NBA8 298 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 ATAD1Q8NBU5 361 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
SEC13-214ENST00000476597 ELSPBP1Q96BH3 223 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 SHDQ96IW2 340 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 TMEM209Q96SK2 561 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 CBWD1Q9BRT8 395 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 LRRC3Q9BY71 257 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 TRIM9Q9C026 710 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 DLGAP2Q9P1A6 1054 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 HSFX1Q9UBD0 423 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 DSEQ9UL01 958 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 SLC27A5Q9Y2P5 690 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 SIT1Q9Y3P8 196 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 YIPF1Q9Y548 306 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
SEC13-214ENST00000476597 GOLGA8IPA6NC78 632 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 GOLGA8JA6NMD2 632 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 KPNA7A9QM74 516 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 EXTL3O43909 919 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 MYL4P12829 197 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 RFX1P22670 979 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 FCARP24071 287 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ALDH1A3P47895 512 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 EPHB3P54753 998 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PFKPQ01813 784 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PRKCQQ04759 706 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PLD1Q13393 1074 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 FOXD4L3Q6VB84 417 aaPredicted RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 METTL23Q86XA0 190 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 THEM5Q8N1Q8 247 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 OR10T2Q8NGX3 314 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 CXorf38Q8TB03 319 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ZNF507Q8TCN5 953 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 CACTINQ8WUQ7 758 aaKnown RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 DHX58Q96C10 678 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ZCWPW1Q9H0M4 648 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ASAH2Q9NR71 780 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 RBAKQ9NYW8 714 aaPredicted RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 RCOR1Q9UKL0 485 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 PCDHA7Q9UN72 937 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 ASB3Q9Y575 518 aa11.66□□□□□ -0.54
SEC13-214ENST00000476597 RIF1Q5UIP0 2472 aaKnown RBP11.66□□□□□ -0.54
SEC13-214ENST00000476597 KIAA0391O15091 583 aaKnown RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 GJA1P17302 382 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 HOXD13P35453 343 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 PNPLA4P41247 253 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 NBL1P41271 181 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 TUFMP49411 452 aaKnown RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 PKP1Q13835 747 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 ANGPT1Q15389 498 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 SV2CQ496J9 727 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 STXBP4Q6ZWJ1 553 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 EPM2AIP1Q7L775 607 aaPredicted RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.54
SEC13-214ENST00000476597 LRRTM3Q86VH5 581 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms