RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 INTS8Q75QN2 995 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 RHOT2Q8IXI1 618 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 IQCF2Q8IXL9 164 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 LRRC8CQ8TDW0 803 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CKAP2Q8WWK9 683 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 WDR11Q9BZH6 1224 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ZC3H12CQ9C0D7 883 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 LRMDAQ9H2I8 198 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 TOPORSQ9NS56 1045 aaPredicted RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 GRID1Q9ULK0 1009 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 UMODL1Q5DID0 1318 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CAPN9O14815 690 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CYP26A1O43174 497 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 FGFR1P11362 822 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 MUTP22033 750 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 STX2P32856 288 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 VAMP7P51809 220 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 RTP1P59025 263 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 FKBP1AP62942 108 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 GPC5P78333 572 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CCDC6Q16204 474 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 P3H1Q32P28 736 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 VPS36Q86VN1 386 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 SNRNP27Q8WVK2 155 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 CLEC4DQ8WXI8 215 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 RSPH1Q8WYR4 309 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 OPTNQ96CV9 577 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 FBXO28Q9NVF7 368 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 WDR70Q9NW82 654 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 KCND2Q9NZV8 630 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 RABL2AQ9UBK7 228 aaPredicted RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 COQ4Q9Y3A0 265 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ZHX2Q9Y6X8 837 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 MAGEB3O15480 346 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 PIAS1O75925 651 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CFBP00751 764 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 IMPDH2P12268 514 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 UNGP13051 313 aaPredicted RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 RARRES1P49788 294 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 HSD17B4P51659 736 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 CBWD2Q8IUF1 395 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 SHKBP1Q8TBC3 707 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ATG4AQ8WYN0 398 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 AKT1S1Q96B36 256 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 MRRFQ96E11 262 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 PITPNM3Q9BZ71 974 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ZWILCHQ9H900 591 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 HSPBP1Q9NZL4 362 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ITM2BQ9Y287 266 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 TMX2Q9Y320 296 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 ASTN2O75129 1339 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 ADGRA3Q8IWK6 1321 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 WFS1O76024 890 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 STBD1O95210 358 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 DLATP10515 647 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 CYP11B1P15538 503 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 CA8P35219 290 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 VPS41P49754 854 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 NCKAP1LP55160 1127 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 WDR4P57081 412 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 MESDQ14696 234 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 STRIP1Q5VSL9 837 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 NLGN1Q8N2Q7 840 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 GBP7Q8N8V2 638 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 BSNDQ8WZ55 320 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 NUP85Q9BW27 656 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 C12orf65Q9H3J6 166 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 KRT82Q9NSB4 513 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 UTP6Q9NYH9 597 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 MYPNQ86TC9 1320 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 C2orf71A6NGG8 1288 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 UNCXA6NJT0 531 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 MIF4GDA9UHW6 222 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 CLDN3O15551 220 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 ECE2O60344 883 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 GZMAP12544 262 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 RFX1P22670 979 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 KYNUQ16719 465 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 WDR72Q3MJ13 1102 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 TBC1D10BQ4KMP7 808 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 OLFML2BQ68BL8 750 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 IRGCQ6NXR0 463 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 CCDC174Q6PII3 467 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 PADI6Q6TGC4 694 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 NSMFQ6X4W1 530 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 ENDOVQ8N8Q3 282 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 GBP5Q96PP8 586 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 RAB3IPQ96QF0 476 aaPredicted RBP8.86□□□□□ -0.99
VAPB-205ENST00000476395 NACC1Q96RE7 527 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 ST6GALNAC4Q9H4F1 302 aa8.86□□□□□ -0.99
VAPB-205ENST00000476395 SERPINA10Q9UK55 444 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms