RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
SSR3-206ENST00000476217 TEX13AQ9BXU3 409 aaPredicted RBP6.36□□□□□ -1.39
SSR3-206ENST00000476217 DDX21Q9NR30 783 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSR3-206ENST00000476217 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
SSR3-206ENST00000476217 SAP30BPQ9UHR5 308 aaKnown RBP6.36□□□□□ -1.39
SSR3-206ENST00000476217 HDAC5Q9UQL6 1122 aa6.36□□□□□ -1.39
SSR3-206ENST00000476217 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
SSR3-206ENST00000476217 KAT6BQ8WYB5 2073 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 KLHL33A6NCF5 533 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 B5MCH6 92 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 AKR1B10O60218 316 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 STARD3NLO95772 234 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
SSR3-206ENST00000476217 CASRP41180 1078 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 MCAMP43121 646 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 PIP4K2AP48426 406 aaPredicted RBP6.35□□□□□ -1.39
SSR3-206ENST00000476217 SLC16A1P53985 500 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
SSR3-206ENST00000476217 APBA1Q02410 837 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 MGAT2Q10469 447 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 CRHR2Q13324 411 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 PROSER3Q2NL68 480 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 ABHD15Q6UXT9 468 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 PALM2Q8IXS6 379 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 CBARPQ8N350 705 aaPredicted RBP6.35□□□□□ -1.39
SSR3-206ENST00000476217 OR7D4Q8NG98 312 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 CYFIP2Q96F07 1278 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 TRIM8Q9BZR9 551 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 USP16Q9Y5T5 823 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 ARFGEF2Q9Y6D5 1785 aa6.35□□□□□ -1.39
SSR3-206ENST00000476217 CICQ96RK0 1608 aaPredicted RBP6.35□□□□□ -1.39
SSR3-206ENST00000476217 SBF2Q86WG5 1849 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 ADCY9O60503 1353 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 PI4KAP2A4QPH2 592 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 MAN2A2P49641 1150 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 PTH1RQ03431 593 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 CDSNQ15517 529 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 CLUL1Q15846 466 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 NAIF1Q69YI7 327 aaPredicted RBP6.34□□□□□ -1.39
SSR3-206ENST00000476217 HTR3DQ70Z44 454 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 KRT27Q7Z3Y8 459 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 DNAJC10Q8IXB1 793 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 PI4KAP1Q8N8J0 262 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 DNAAF4Q8WXU2 420 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
SSR3-206ENST00000476217 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 MAP3K2Q9Y2U5 619 aa6.34□□□□□ -1.39
SSR3-206ENST00000476217 ZNF831Q5JPB2 1677 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 GABRDO14764 452 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 TEX33O43247 280 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 KATNA1O75449 491 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 A1BGP04217 495 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 MYBL2P10244 700 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 OSMP13725 252 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 MGAT1P26572 445 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 IARSP41252 1262 aaKnown RBP6.33□□□□□ -1.4
SSR3-206ENST00000476217 WASP42768 502 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 FLT3LGP49771 235 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 PER3P56645 1201 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 NEXNQ0ZGT2 675 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 KSR2Q6VAB6 950 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 KIF6Q6ZMV9 814 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 CENPQQ7L2Z9 268 aaPredicted RBP6.33□□□□□ -1.4
SSR3-206ENST00000476217 COPS6Q7L5N1 327 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 FUBP3Q96I24 572 aaKnown RBP eCLIP6.33□□□□□ -1.4
SSR3-206ENST00000476217 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 ZBTB40Q9NUA8 1239 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 AFDNP55196 1824 aaKnown RBP6.33□□□□□ -1.4
SSR3-206ENST00000476217 COL5A3P25940 1745 aaPredicted RBP6.33□□□□□ -1.4
SSR3-206ENST00000476217 NUP188Q5SRE5 1749 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
SSR3-206ENST00000476217 PRR5-ARHGAP8B1AHC4 643 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 PJA2O43164 708 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 PPFIA4O75335 1185 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 PEX11BO96011 259 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 GNAI3P08754 354 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 CYP19A1P11511 503 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 CCND1P24385 295 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 CCT2P78371 535 aaKnown RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 SP140Q13342 867 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 FAM47AQ5JRC9 791 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 SPDYAQ5MJ70 313 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 SPTY2D1Q68D10 685 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 PNMA8AQ86V59 439 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 GPATCH3Q96I76 525 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 CEP89Q96ST8 783 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 MEIS3Q99687 375 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 CPPED1Q9BRF8 314 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 RWDD1Q9H446 243 aaPredicted RBP6.32□□□□□ -1.4
SSR3-206ENST00000476217 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 PCDHGA2Q9Y5H1 932 aa6.32□□□□□ -1.4
SSR3-206ENST00000476217 RREB1Q92766 1687 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 1860.7 ms