RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	CASKIN2	Q8WXE0	1202 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	MKS1	Q9NXB0	559 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	C11orf21	Q9P2W6	132 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	DKK2	Q9UBU2	259 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	SLC23A1	Q9UHI7	598 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	TRHDE	Q9UKU6	1024 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	RUVBL1	Q9Y265	456 aa	Known RBP	6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	ATP11B	Q9Y2G3	1177 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	LRPPRC	P42704	1394 aa	Known RBP	6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	PARD3	Q8TEW0	1356 aa		6.26	□□□□□ -1.41
PRKD3-208	ENST00000475912	CCDC144A	A2RUR9	1427 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	TNS3	Q68CZ2	1445 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	ABCA3	Q99758	1704 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	GPR32	O75388	356 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	AMY1A	P04745	511 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	CDK11B	P21127	795 aa	Known RBP	6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	GUCY2F	P51841	1108 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	ACAP2	Q15057	778 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	OTUD7B	Q6GQQ9	843 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	ARHGEF19	Q8IW93	802 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	RHOT2	Q8IXI1	618 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	OR56A1	Q8NGH5	318 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	JADE3	Q92613	823 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	ADAM2	Q99965	735 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	WDR11	Q9BZH6	1224 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	SERHL2	Q9H4I8	314 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	FBXO34	Q9NWN3	711 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	INTU	Q9ULD6	942 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	FPGT-TNNI3K	V9GXZ4	949 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	NRK	Q7Z2Y5	1582 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	NAIP	Q13075	1403 aa		6.25	□□□□□ -1.41
PRKD3-208	ENST00000475912	COL4A3	Q01955	1670 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MARCH11	A6NNE9	402 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	B3GALT2	O43825	422 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	POMC	P01189	267 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MYBL2	P10244	700 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	SLC6A2	P23975	617 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	DDX6	P26196	483 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	BMPR1A	P36894	532 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	ZEB1	P37275	1124 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	INHBE	P58166	350 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	PURA	Q00577	322 aa	Known RBP	6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	AMPD3	Q01432	767 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	REST	Q13127	1097 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MTM1	Q13496	603 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MTMR1	Q13613	665 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	FAM50A	Q14320	339 aa	Known RBP	6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	SYDE2	Q5VT97	1194 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	TSHZ3	Q63HK5	1081 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	SEM1	Q6ZVN7	128 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	UBE3B	Q7Z3V4	1068 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	KRT28	Q7Z3Y7	464 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	RHOT1	Q8IXI2	618 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	BEND2	Q8NDZ0	799 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MTMR8	Q96EF0	704 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	C7orf25	Q9BPX7	421 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	ZSWIM1	Q9BR11	485 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	MANSC1	Q9H8J5	431 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	KLHL11	Q9NVR0	708 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	TUBD1	Q9UJT1	453 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	SPATA31A5	Q5VU36	1347 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	SPATA31A7	Q8IWB4	1347 aa		6.24	□□□□□ -1.41
PRKD3-208	ENST00000475912	TEX33	O43247	280 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	NDUFS2	O75306	463 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	KATNA1	O75449	491 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	PRSS23	O95084	383 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	GC	P02774	474 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	CFI	P05156	583 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	HLA-DOA	P06340	250 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	C5AR1	P21730	350 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	PROZ	P22891	400 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	EVA1C	P58658	441 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	ATP8B2	P98198	1209 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	GUCY1B3	Q02153	619 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	COL10A1	Q03692	680 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	ITK	Q08881	620 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	TP53BP2	Q13625	1128 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	UBXN2B	Q14CS0	331 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	SMN1	Q16637	294 aa	Known RBP	6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	KRTAP15-1	Q3LI76	137 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	HECTD2	Q5U5R9	776 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	PRPF38A	Q8NAV1	312 aa	Known RBP	6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	SSH1	Q8WYL5	1049 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	RAB24	Q969Q5	203 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	CYFIP2	Q96F07	1278 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	FAXDC2	Q96IV6	333 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	MYOM1	P52179	1685 aa		6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.23	□□□□□ -1.41
PRKD3-208	ENST00000475912	CLTCL1	P53675	1640 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PLEKHH1	Q9ULM0	1364 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	CASZ1	Q86V15	1759 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	OVOL3	O00110	214 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	XPOT	O43592	962 aa	Known RBP	6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA12	O60330	932 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	SPDEF	O95238	335 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	ELANE	P08246	267 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	DDC	P20711	480 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	NBPF8	Q3BBV2	869 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms