RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
ITGA6-210ENST00000475302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
ITGA6-210ENST00000475302 SAGE1Q9NXZ1 904 aa10.37□□□□□ -0.75
ITGA6-210ENST00000475302 DDX20Q9UHI6 824 aaKnown RBP10.37□□□□□ -0.75
ITGA6-210ENST00000475302 CDC23Q9UJX2 597 aa10.37□□□□□ -0.75
ITGA6-210ENST00000475302 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
ITGA6-210ENST00000475302 NCANO14594 1321 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 MACROD2A1Z1Q3 448 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 CTAGE9A4FU28 777 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 URI1O94763 535 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 SLU7O95391 586 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 MOCS3O95396 460 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ADH1CP00326 375 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 CHRNA1P02708 482 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ATP1A1P05023 1023 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 UQCRHP07919 91 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 H2AFZP0C0S5 128 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 UNGP13051 313 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TNFAIP3P21580 790 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 PIK3CAP42336 1068 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ASPAP45381 313 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 HADHBP55084 474 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 NOP14P78316 857 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 HTRA3P83110 453 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 BIRC3Q13489 604 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TUBB2AQ13885 445 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TRIM71Q2Q1W2 868 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 DCAF4L1Q3SXM0 396 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 WDR44Q5JSH3 913 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 JADE1Q6IE81 842 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 SLC27A1Q6PCB7 646 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 H2AFVQ71UI9 128 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 NT5DC4Q86YG4 428 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 CD302Q8IX05 232 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 SLC43A3Q8NBI5 491 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TRIM58Q8NG06 486 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 U2AF1L4Q8WU68 220 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ZMAT2Q96NC0 199 aaKnown RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 NAPGQ99747 312 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 OCSTAMPQ9BR26 566 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TUBB2BQ9BVA1 445 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 TLR10Q9BXR5 811 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 BCO2Q9BYV7 579 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 C1orf112Q9NSG2 853 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 STXBP5LQ9Y2K9 1186 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 DERAQ9Y315 318 aa10.36□□□□□ -0.75
ITGA6-210ENST00000475302 GRID2IPA4D2P6 1211 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ANKRD62A6NC57 917 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 FKTNO75072 461 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 MTA2O94776 668 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ERLIN2O94905 339 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 CALCAP01258 141 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 TFRCP02786 760 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 CYP1A1P04798 512 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 MMEP08473 750 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 TBXAS1P24557 533 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 PRMT2P55345 433 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 TFAMQ00059 246 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 PTPN11Q06124 597 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 NOTUMQ6P988 496 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 RSRC2Q7L4I2 434 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 VPS36Q86VN1 386 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 FAM228AQ86W67 206 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 TXLNBQ8N3L3 684 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 SMG8Q8ND04 991 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 WHAMMQ8TF30 809 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ZNF296Q8WUU4 475 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ARHGEF26Q96DR7 871 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 SNX27Q96L92 541 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ACAP3Q96P50 834 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 TSEN34Q9BSV6 310 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 SENP6Q9GZR1 1112 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 SDCBP2Q9H190 292 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 SPC25Q9HBM1 224 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 ATP13A2Q9NQ11 1180 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 LUC7LQ9NQ29 371 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
ITGA6-210ENST00000475302 JRKLQ9Y4A0 524 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 PCDHB2Q9Y5E7 798 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 RALGAPA2Q2PPJ7 1873 aa10.35□□□□□ -0.75
ITGA6-210ENST00000475302 BUB1O43683 1085 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 PHACTR2O75167 634 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 RTN2O75298 545 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 TACC1O75410 805 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 TADA3O75528 432 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 NPTXRO95502 500 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 TNNC2P02585 160 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 KCNE1P15382 129 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 YY1P25490 414 aa10.34□□□□□ -0.75
ITGA6-210ENST00000475302 ACLYP53396 1101 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms