RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 HPS3Q969F9 1004 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 SAAL1Q96ER3 474 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 SENP8Q96LD8 212 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 RPP25Q9BUL9 199 aaKnown RBP13.26□□□□□ -0.29
SSR1-205ENST00000475213 OXCT2Q9BYC2 517 aaPredicted RBP13.26□□□□□ -0.29
SSR1-205ENST00000475213 TRIM9Q9C026 710 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 AVENQ9NQS1 362 aaPredicted RBP13.26□□□□□ -0.29
SSR1-205ENST00000475213 DPP3Q9NY33 737 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
SSR1-205ENST00000475213 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 POLR2DO15514 142 aaKnown RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 VNN2O95498 520 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 LDHAP00338 332 aaKnown RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 ODC1P11926 461 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 HOXB3P14651 431 aaPredicted RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 NPR3P17342 541 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 PAX3P23760 479 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 ME1P48163 572 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 PTPN5P54829 565 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 WNT7BP56706 349 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 ASIC1P78348 528 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 AMPD3Q01432 767 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 TWF1Q12792 350 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 TCF15Q12870 199 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 CWF19L1Q69YN2 538 aaKnown RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 ATL3Q6DD88 541 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 OVOS1Q6IE37 1185 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 NPAS3Q8IXF0 933 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 SIX5Q8N196 739 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 FLCNQ8NFG4 579 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 CORO1BQ9BR76 489 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 CBWD1Q9BRT8 395 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 WNT16Q9UBV4 365 aa13.25□□□□□ -0.29
SSR1-205ENST00000475213 MRPS23Q9Y3D9 190 aaKnown RBP13.25□□□□□ -0.29
SSR1-205ENST00000475213 KRBA1A5PL33 1030 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 GOLGA8IPA6NC78 632 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 GOLGA8JA6NMD2 632 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CYP11A1P05108 521 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CEBPBP17676 345 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 TAF6P49848 677 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CLCN5P51795 746 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 GPR17Q13304 367 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 PRSS36Q5K4E3 855 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 RESP18Q5W5W9 173 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CNNM4Q6P4Q7 775 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 MTSS1LQ765P7 747 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 NT5DC4Q86YG4 428 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 ELMOD1Q8N336 334 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 GPR152Q8TDT2 470 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 TCEAL4Q96EI5 215 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 C7orf25Q9BPX7 421 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CRISPLD1Q9H336 500 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 PCIF1Q9H4Z3 704 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CEP72Q9P209 647 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 RCOR1Q9UKL0 485 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CFAP45Q9UL16 551 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 CA14Q9ULX7 337 aa13.24□□□□□ -0.29
SSR1-205ENST00000475213 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 CYB561D2O14569 222 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 PI15O43692 258 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 EXTL3O43909 919 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 CASP1P29466 404 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 HOXD13P35453 343 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 CCR2P41597 374 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 DUSP4Q13115 394 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 ARMCX5Q6P1M9 558 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 NOC3LQ8WTT2 800 aaKnown RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 ZNF512Q96ME7 567 aaPredicted RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
SSR1-205ENST00000475213 GDE1Q9NZC3 331 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 DSEQ9UL01 958 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
SSR1-205ENST00000475213 MTMR11A4FU01 709 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 NRG2O14511 850 aaPredicted RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 ZNF197O14709 1029 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 KIAA0391O15091 583 aaKnown RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSR1-205ENST00000475213 AOC1P19801 751 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 GPC5P78333 572 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 EHHADHQ08426 723 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 FAM26FQ5R3K3 315 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms