RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 ODC1P11926 461 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 POLR2BP30876 1174 aaKnown RBP17.76■□□□□ 0.43
ATG4B-216ENST00000475195 GPR17Q13304 367 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 ZCWPW2Q504Y3 356 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-216ENST00000475195 LIMS2Q7Z4I7 341 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 TCEAL8Q8IYN2 117 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 PLEKHO2Q8TD55 490 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
ATG4B-216ENST00000475195 ZNF516Q92618 1163 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 ZNF560Q96MR9 790 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 CGRRF1Q99675 332 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 AFF4Q9UHB7 1163 aaKnown RBP17.76■□□□□ 0.43
ATG4B-216ENST00000475195 NR2E1Q9Y466 385 aa17.76■□□□□ 0.43
ATG4B-216ENST00000475195 SMC2O95347 1197 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 CST3P01034 146 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-216ENST00000475195 NR3C1P04150 777 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-216ENST00000475195 UBE2HP62256 183 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 LMBRD2Q68DH5 695 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-216ENST00000475195 OVOS1Q6IE37 1185 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 CCDC149Q6ZUS6 474 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 DPH6Q7L8W6 267 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 USP37Q86T82 979 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 RNF135Q8IUD6 432 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 RPGRIP1Q96KN7 1286 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 RTP3Q9BQQ7 232 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 MAPK8IP1Q9UQF2 711 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 DENND4AQ7Z401 1863 aa17.75■□□□□ 0.43
ATG4B-216ENST00000475195 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 SEC24AO95486 1093 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 TNNC2P02585 160 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 TNNI1P19237 187 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 CASP4P49662 377 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 PPM1LQ5SGD2 360 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 CENPPQ6IPU0 288 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 ZDHHC14Q8IZN3 488 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 SLC7A14Q8TBB6 771 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 SPATA18Q8TC71 538 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 TMC2Q8TDI7 906 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
ATG4B-216ENST00000475195 SMARCE1Q969G3 411 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 CCDC127Q96BQ5 260 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 FNBP1Q96RU3 617 aa17.74■□□□□ 0.43
ATG4B-216ENST00000475195 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
ATG4B-216ENST00000475195 VNN2O95498 520 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 STAU1O95793 577 aaKnown RBP17.73■□□□□ 0.43
ATG4B-216ENST00000475195 FAM163BP0C2L3 166 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 DLATP10515 647 aaKnown RBP17.73■□□□□ 0.43
ATG4B-216ENST00000475195 PRCPP42785 496 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 AP3M2P53677 418 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 ENPEPQ07075 957 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 EDRF1Q3B7T1 1238 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 WSCD1Q658N2 575 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 RNF19BQ6ZMZ0 732 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 ERCC4Q92889 916 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-216ENST00000475195 HSFX1Q9UBD0 423 aa17.73■□□□□ 0.43
ATG4B-216ENST00000475195 C2CD4DB7Z1M9 353 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 GABRDO14764 452 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 IKBKBO14920 756 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 C4BPAP04003 597 aaKnown RBP17.72■□□□□ 0.43
ATG4B-216ENST00000475195 KRT19P08727 400 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ALADP13716 330 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 RPL13P26373 211 aaKnown RBP17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ELF1P32519 619 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ARPP19P56211 112 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ADCY1Q08828 1119 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 MYO1EQ12965 1108 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ADAM9Q13443 819 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 OTOP3Q7RTS5 596 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 METTL23Q86XA0 190 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 SMYD4Q8IYR2 804 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ADSSL1Q8N142 457 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 THEM5Q8N1Q8 247 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 TMEM86AQ8N2M4 240 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 TOP6BLQ8N6T0 577 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 OR10T2Q8NGX3 314 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 ZCWPW1Q9H0M4 648 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 EPHX3Q9H6B9 360 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 PIDD1Q9HB75 910 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 FRMD4BQ9Y2L6 1034 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 TSC2P49815 1807 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 CLUHO75153 1309 aa17.72■□□□□ 0.43
ATG4B-216ENST00000475195 TRIOO75962 3097 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 LRRIQ3A6PVS8 624 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 N4BP1O75113 896 aaKnown RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 XYLBO75191 536 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 AKAP3O75969 853 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 NR2F2P24468 414 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 SOWAHAQ2M3V2 549 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 C1orf220Q5T0J3 134 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 ZC3H3Q8IXZ2 948 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms