RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 C9orf57Q5W0N0 161 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 ATL3Q6DD88 541 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 STXBP4Q6ZWJ1 553 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 RTL10Q7L3V2 364 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 HPS3Q969F9 1004 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 SAAL1Q96ER3 474 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 STRA6Q9BX79 667 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 FGFBP2Q9BYJ0 223 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 TMEM206Q9H813 350 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 DPP3Q9NY33 737 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 EPS15L1Q9UBC2 864 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 DNMT3BQ9UBC3 853 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 DUSP12Q9UNI6 340 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 DERAQ9Y315 318 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 C2CD2Q9Y426 696 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 TSC2P49815 1807 aa10.21□□□□□ -0.78
PDPN-204ENST00000475043 GOLGA8IPA6NC78 632 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 GOLGA8JA6NMD2 632 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 NARSO43776 548 aaKnown RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 IL18RAPO95256 599 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 SEC24AO95486 1093 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 LDHAP00338 332 aaKnown RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 CFHP08603 1231 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ODC1P11926 461 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 PTPN2P17706 415 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 AVPR2P30518 371 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 TPGS2Q68CL5 300 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 OVOS1Q6IE37 1185 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ARMCX5Q6P1M9 558 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 CRELD2Q6UXH1 353 aaPredicted RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 RNF19BQ6ZMZ0 732 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 TCEAL8Q8IYN2 117 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ELMOD1Q8N336 334 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 SLC44A3Q8N4M1 653 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 DOCK8Q8NF50 2099 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 FLCNQ8NFG4 579 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ITFG1Q8TB96 612 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ING5Q8WYH8 240 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 FGF13Q92913 245 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ZFRQ96KR1 1074 aaKnown RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 SENP8Q96LD8 212 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 PGLYRP2Q96PD5 576 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 CORO1BQ9BR76 489 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 TRIM9Q9C026 710 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 KCNH6Q9H252 994 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 PCIF1Q9H4Z3 704 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 RBAKQ9NYW8 714 aaPredicted RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 CDH7Q9ULB5 785 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 PCDHA7Q9UN72 937 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 INSL5Q9Y5Q6 135 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ZFP37Q9Y6Q3 630 aaPredicted RBP10.2□□□□□ -0.78
PDPN-204ENST00000475043 NUMBLQ9Y6R0 609 aa10.2□□□□□ -0.78
PDPN-204ENST00000475043 ARHGEF37A1IGU5 675 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 PIRO00625 290 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 SPTLC1O15269 473 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 OAZ2O95190 189 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 RHOP08100 348 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 POU2F2P09086 479 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 OR4Q2P0C623 313 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 GARTP22102 1010 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 RFX1P22670 979 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 AFMP43652 599 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 AARSP49588 968 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDPN-204ENST00000475043 TAF6P49848 677 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 TWF1Q12792 350 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 HTR4Q13639 388 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 IQCEQ6IPM2 695 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 PARM1Q6UWI2 310 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 EFCAB13Q8IY85 973 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 SIX5Q8N196 739 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 GLIS3Q8NEA6 775 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 ZSWIM2Q8NEG5 633 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 FGF14Q92915 247 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 MCRS1Q96EZ8 462 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 PRRX2Q99811 253 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 PYM1Q9BRP8 204 aaKnown RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 CBWD1Q9BRT8 395 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 OXCT2Q9BYC2 517 aaPredicted RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 BLZF1Q9H2G9 400 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 AFF4Q9UHB7 1163 aaKnown RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 MRPS23Q9Y3D9 190 aaKnown RBP10.19□□□□□ -0.78
PDPN-204ENST00000475043 SCN1AP35498 2009 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 NOTCH4Q99466 2003 aa10.19□□□□□ -0.78
PDPN-204ENST00000475043 ANO9A1A5B4 782 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 OR6C75A6NL08 312 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CYB561D2O14569 222 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 EXTL3O43909 919 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 SRFP11831 508 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 TYMPP19971 482 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 PAX3P23760 479 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CASP1P29466 404 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 SLC5A9Q2M3M2 681 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 SV2CQ496J9 727 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms