RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TNFSF9P41273 254 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 ALDH1A3P47895 512 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 FNTBP49356 437 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 TOB1P50616 345 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-209ENST00000474647 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-209ENST00000474647 PPP2R3AQ06190 1150 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 DMWDQ09019 674 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 DUSP4Q13115 394 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 SRSF5Q13243 272 aaKnown RBP15.23■□□□□ 0.03
CCDC78-209ENST00000474647 GAS6Q14393 721 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 DTHD1Q6ZMT9 781 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 Q6ZS52 159 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 MSANTD3Q96H12 275 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 PLIN2Q99541 437 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 CRISPLD1Q9H336 500 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 SLC27A5Q9Y2P5 690 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 LAD1O00515 517 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 DPYSL4O14531 572 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 CHADO15335 359 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 SOAT2O75908 522 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 RETP07949 1114 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 GUCY2CP25092 1073 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 MCL1Q07820 350 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 IL17AQ16552 155 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 OVOS1Q6IE37 1185 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 MAMSTRQ6ZN01 415 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 SPEM1Q8N4L4 309 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 TMEM161BQ8NDZ6 487 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 NETO1Q8TDF5 533 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 CDK5RAP3Q96JB5 506 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 ZFYVE19Q96K21 471 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 MMTAG2Q9BU76 263 aaKnown RBP15.22■□□□□ 0.03
CCDC78-209ENST00000474647 HAPLN2Q9GZV7 340 aa15.22■□□□□ 0.03
CCDC78-209ENST00000474647 UBQLN1Q9UMX0 589 aaKnown RBP15.22■□□□□ 0.03
CCDC78-209ENST00000474647 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 OR6C75A6NL08 312 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 SPECC1L-ADORA2AF8WAN1 911 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.03
CCDC78-209ENST00000474647 OAZ2O95190 189 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 CLTAP09496 248 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 U2AF2P26368 475 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC78-209ENST00000474647 GABRR2P28476 465 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 LRPAP1P30533 357 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 CTHP32929 405 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 PRPHP41219 470 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 LIG4P49917 911 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 CDR1P51861 262 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 FCHO2Q0JRZ9 810 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 PON2Q15165 354 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 PPM1JQ5JR12 505 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 GPR158Q5T848 1215 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 TXNDC11Q6PKC3 985 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 ARID3BQ8IVW6 561 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-209ENST00000474647 TTC9BQ8N6N2 239 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 LRRC3Q9BY71 257 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-209ENST00000474647 ATXN3LQ9H3M9 355 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 C8orf33Q9H7E9 229 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-209ENST00000474647 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 SEMA4GQ9NTN9 838 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 GTSE1Q9NYZ3 720 aa15.21■□□□□ 0.03
CCDC78-209ENST00000474647 TTC26A0AVF1 554 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 MTMR11A4FU01 709 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 HNRNPDLO14979 420 aaKnown RBP15.2■□□□□ 0.02
CCDC78-209ENST00000474647 HRO43593 1189 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
CCDC78-209ENST00000474647 LRP3O75074 770 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 SEC24BO95487 1268 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 ODC1P11926 461 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 GPR17Q13304 367 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 ARHGAP15Q53QZ3 475 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 MCTP1Q6DN14 999 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 CEP68Q76N32 757 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 HAUS6Q7Z4H7 955 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 LONP2Q86WA8 852 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 SYT2Q8N9I0 419 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-209ENST00000474647 ATAD1Q8NBU5 361 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 TMEM209Q96SK2 561 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-209ENST00000474647 NTPCRQ9BSD7 190 aaKnown RBP15.2■□□□□ 0.02
CCDC78-209ENST00000474647 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
CCDC78-209ENST00000474647 MYBPHLA2RUH7 354 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 VWA3AA6NCI4 1184 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 K7ENM7 598 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 K7ESF4 209 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 PPEF2O14830 753 aa15.19■□□□□ 0.02
CCDC78-209ENST00000474647 SLC30A4O14863 429 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms